Pseudomonas stutzeri 19SMN4, UIB01_RS16210
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain 19SMN4, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTCAGGTTGTGCGCGACGATCTCCTCGAGCTTCGCCTCCGCCGCTTCGCGTCCCGCCGAGGCCATCCAGCGCAGCGTGGTGCTGCGCGGATTGAAGGTGC GCTCGATGCGCTCCAGCTCCTTCAGCGAAAGGCTCTGTTGCGGGTGGCGATACATGCAGGCGAAGCCGATGCGGGGCATGGAGTTTTCTCGTCGGTGGCA GGCCGGCGTTGCGGCCACTGCCTGTTTAGTCCCGCCAGCCTCGCGGCGAGTGCCCCGCCACCGACGAAACACCACCGTAGGACCGACTACCGGCGGCCGC ACCTTGGCAGGCCTATGCTTGCAGACATGCCGACTCGGCAGTGTGTTGACAGACCCGCAGCGGACCTTTACGTTAACGTAAAGCAGCGAACGATCATCCA TACCGATGACCTAGAACCGCTACCAGAGCGCCGGCCTGCACTCCGCCGGACGAACGAATCCTCTGAAAACAGAACAATTACAAGACAAGCAGGTGGCCCC
|
|
| DNA Sequence for Gene |
>UIB01_RS16210
ATGAACTACTCCAGCCTCAATTTCGCCCTCGGTGAAACCATCGACATGCTGCGCGAGCAGCTGCAGGCCTTCGTCGCCGCCGAGATTGCCCCGCGCGCCG AAGCCATCGATCAGGAAAACCTGTTCCCGGCGGACATGTGGAAGAAATTCGGCGAGATGGGTCTGCTCGGCGTGACCGTCTCCGAGGAGTACGGCGGTGC CGGCCTCGGCTACCTAGCCCACGTGGTGGCGATGGAAGAGATCAGCCGCGGCTCGGCCTCGGTCGCCCTCTCCTACGGCGCCCACTCCAACCTGTGCGTC AACCAGATCAACCGCAACGGCAACCCCGAGCAGAAGGCCCGCTACCTGCCCAAGCTGATCAGCGGCGAACACGTCGGTGCGCTGGCCATGAGCGAGCCGA ATGCCGGCTCCGACGTGGTCTCCATGAAGCTGCGCGCCGAAAAGCGCGGCGACCGCTACGTGCTCAACGGCAGCAAGACCTGGATCACCAACGGCCCGGA CGCCAACACCTACGTGATCTACGCCAAGACCGACCTGGACAAGGGCGCGCACGGCATCACCGCGTTCATCGTCGAGCGCGACTGGAAGGGTTTCTCCCGC GGCAACAAGTTCGACAAGCTCGGCATGCGCGGCTCCAACACCTGCGAGCTGTTCTTCGATGACGTCGAGGTGCCGGAAGAGAATGTGCTGGGCCTCGAGA ACGGCGGCGTCAAGGTGCTGATGAGCGGCCTGGACTACGAACGCGTGGTGCTGGCCGGCGGCCCGACCGGGATCATGCAGTCCTGCCTCGATGTGGTGGT GCCCTACATCCACGACCGCAAGCAGTTCGGTCAGAGCATCGGCGAGTTCCAGTTCATCCAGGGCAAGGTGGCGGACATGTACACCCAGCTCAACGCCAGC CGCGCCTATCTCTACGCCGTCGCCCAGGCCTGCGACCGTGGCGAGACCACCCGCAAGGACGCCGCCGGGGTGATCCTCTATACCGCCGAAAACGCCACGC AGATGGCCCTGCAGGCGATCCAGATCCTCGGCGGCAACGGCTATATCAACGAATTCCCCACCGGCCGCCTGCTGCGTGACGCCAAGCTCTACGAGATCGG CGCCGGCACCAGCGAGATCCGCCGCATGCTGATCGGCCGCGAGCTGTTCAACGAATCCAGGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCCTGCGGGCGGAAAGAACGCCCCAGCCTCGTAGGGTGGAAAACCGCGAAGCGTTTTCCACCGCAGTCGGTGGATGGCAGAGCCATCCATGATGGAATTG AACGGAGCCAACCATGGCCATCCTGCACACCCAGATCAATACCCGTTCACCGGAGTTCGCCGCCAACAGCGCGGCGATGCTCGACCAGGTGAACAACCTG CGCGCCCTGCTCGGCCGCGTCAGCGAAGGCGGTGGCGCCACCGCCCAGCAGCGCCATGTCTCACGCGGAAAGCTCTTGGTGCGCGAGCGCATCGACACCC TGCTCGACGCCGGCTCGGCCTTTCTCGAACTCGCGCCGTTGGCCGCCCATGAGGTCTACGGCGAAGACGTCGCCGCCGCCGGCGTGGTCGCGGGTATCGG CCGCGTCGAAGGCGTCGAGTGCATGATCATCGCCAACGACGCCACCGTTAAAGGCGGCACCTACTACCCGCTGACGGTGAAAAAGCACCTGCGCGCGCAG
|
|
| Amino Acid Sequence |
>isovaleryl-CoA dehydrogenase
MNYSSLNFALGETIDMLREQLQAFVAAEIAPRAEAIDQENLFPADMWKKFGEMGLLGVTVSEEYGGAGLGYLAHVVAMEEISRGSASVALSYGAHSNLCV NQINRNGNPEQKARYLPKLISGEHVGALAMSEPNAGSDVVSMKLRAEKRGDRYVLNGSKTWITNGPDANTYVIYAKTDLDKGAHGITAFIVERDWKGFSR GNKFDKLGMRGSNTCELFFDDVEVPEENVLGLENGGVKVLMSGLDYERVVLAGGPTGIMQSCLDVVVPYIHDRKQFGQSIGEFQFIQGKVADMYTQLNAS RAYLYAVAQACDRGETTRKDAAGVILYTAENATQMALQAIQILGGNGYINEFPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFNESR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|