Pseudomonas stutzeri 19SMN4, UIB01_RS16010 (sbcB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain 19SMN4, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CACCATGTACCACCATTGCACGAGGAACAACAGCAATGTGGCCAGGCCCATGCCGAATTTGCCCAGCAGTCCGAGCGTGATAAACAGGGCCAGCAGGATG GCAGCGCGAATCGCCAAGTCGATGGCAAAGGCGAGCGCGCGAGGCACCAGCCCGGCAGGGCGCAGAAGCAGATCGATGCCCTCGGGTGTCTCGACGCGGA GGTAGGTATCGAGCAGGGCTTGTCGGTCGAGTGTGGAAGGCAAAGGTAAGGTCGTCTGAGGCCAGGCAAAGGTCGATGCTATGCGGCAACCGCCGCTGCG GCAATGCGCAGAGTCTCGTGCTTGAGCCCGGCGCGCCGATCGGGTGCGATTATGGCGAAATGCCTGCTCGATTGCAGGATGCCGTTCGCAGAGCGGTGCG CCGCTTAAACACATCTGCAGTGCCAGCCTGGTACCGGCCTGGGTCTGCGATGTGTCGGTTCGGCTGATAGACTGCAGCGCTGATCGAGAAGGACCCTCCC
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| DNA Sequence for Gene |
>UIB01_RS16010
|sbcB
GTGACCCCAAGCATCTTCTGGTACGACTTCGAAACCACCGGGATCTCCCCCAGCCGCGACCGCCCGTTGCAAGTGGCGGGCATTCGCACCAACGAGGCGC TCGAGGAAATTGGCGAGCCGCTGAACATCTACTGTCGCCCCTCAGACGACATTCTTCCGCATCCTGCCGCGTGCCTGGTTACTGGAATCACGCCGTCAGT CTTGCAACAGAAAGGATTGTGCGAAGCGGAGTTCATCCAGCGTCTGCATCAGCAACTGTCCACGCCCGGGACCTGCGGTGCCGGTTATAACAGCCTGCGC TTCGACGATGAGGTGACCCGCTACAGCCTATACCGCAACTTCTACGATCCTTACGCGCGTGAATGGCAGGGCGGCAACAGTCGTTGGGATCTGATCGACC TGGTGCGTACCGCTTATGCGTTACGTCCGGAGGGTATCGCCTGGCCTGAGGAGGATGGCCGGGTGACGCTCAAGCTTGAGCGCCTGAGCGTGGCTAACGG GCTGGAGCACTTGAACGCTCACGACGCCCTGTCCGATGTGCGCGCCACCATTGGCCTGGCCAGACTCATTCGAGATCGCCAGCCACGGCTGTATGACTAT CTCTTCAGCTTGCGGCGCAAACAGGCTGTGCTCGACCAGATCACTTTGCTCGAGCCGCTGGTGCATGTGTCCGGCCGTTTTTCGGCAGCACGGCATTATC TTTCCGTGGTGCTGCCGCTGGGCTGGCATCCGCGCAATCGCAATGCATTGATCGTCTGCGATCTGCAGGCAGATTCCCAGCCGCTCTTGCAGGAAACCTC CGAAACCTTGCGGCAGCGCCTTTATACCCGTCGCGATCAACTCGCCGAAGGCGAGCTGCCGGTGCCCTTGAAGTTGGTACACATCAACAAGTGTCCGGTG CTGGCACCGCTCAAGGTGCTGCGCGAAGCAGATATTCAACGGCTGGCTCTGGATATGCCGCTCTGCCAGGCTCGCGCCGCTGCATTACGTGAGCAACGGC AAGTCTGGAGCGGCAAGCTGGAGGAGATCTATCGTGAGGAAGGCTTCGTCGGAAGCGAAGACCCCGAGCAACAGCTGTATGACGGTTTTCTCGGCGACCG CGACCGGCGGCTGTGCGACCAAGTCCGCAGCCTGGCTCCTGCCGAGCTGGCGGGATATCCGTGTCGATTCGACGATGCTCGCCTCGAGGAGCTGTTATTC CGTTACCGCGCACGAAACTTCCCCGAAGCGTTATCCGCTGAGGAGCAAGCGCAGTGGCGTCGGTTCTGCCAGCAACGACTGAGCGATGATGCCTACGGAG CACCTAACACGCTTGCACAGTTCGAGGCGGGTATTGAGCAATCCATGGTTACTGCCACGCCCGCGCAGCAACAACTGTTACAGCAATGGCGCGACTACGG CCTAGGGCTGCGCGAGCGCTACGGGCTGGCTAACTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTCGCCGAAAGACTTTGGCAGTGCGTGGGGAAGGTGGCGGTTCGCAGAGCTGAAACTAAGGTAAAGGTAGGCAAATAAAAAACGCCATTTCCCGACATCG CTGATTAATGTCGAGAAATGGCGTTCGATTTAAACCGTAAACGCTTAGCCGAGAAGGGTGGCCCAGCTTTCCACGGTTTCGGAGCCCCACTGGGCTTTCC ATTCTTTCAATGTCTTGTGATTGCCACCTTTGGTTTCAATCACTTCGCCGCTATGCGGGTTCTTGTACTGCTTCACGCGGCGCGCGCGCTTGCTGGTCGC CGGAGCTTTTGTAGCGCGCTGGCTTTTGCCGTTACGAGAGGCTTCCGGATCAAGCAGGGCAATGATGTCGCGCAGGGACTTCTGATACTCGCCCATGAGT TCGCGCAGCTTACCTTCGAACTCCAGTTCCTTTTTCAGTTTGTCGTCTTCGGAAAGCGACTTCAGGCGCTCTTGAAGTTCCTTGATGGCTTCCTCAGTAG
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| Amino Acid Sequence |
>exonuclease I
MTPSIFWYDFETTGISPSRDRPLQVAGIRTNEALEEIGEPLNIYCRPSDDILPHPAACLVTGITPSVLQQKGLCEAEFIQRLHQQLSTPGTCGAGYNSLR FDDEVTRYSLYRNFYDPYAREWQGGNSRWDLIDLVRTAYALRPEGIAWPEEDGRVTLKLERLSVANGLEHLNAHDALSDVRATIGLARLIRDRQPRLYDY LFSLRRKQAVLDQITLLEPLVHVSGRFSAARHYLSVVLPLGWHPRNRNALIVCDLQADSQPLLQETSETLRQRLYTRRDQLAEGELPVPLKLVHINKCPV LAPLKVLREADIQRLALDMPLCQARAAALREQRQVWSGKLEEIYREEGFVGSEDPEQQLYDGFLGDRDRRLCDQVRSLAPAELAGYPCRFDDARLEELLF RYRARNFPEALSAEEQAQWRRFCQQRLSDDAYGAPNTLAQFEAGIEQSMVTATPAQQQLLQQWRDYGLGLRERYGLAN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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