Strain | Pseudomonas stutzeri strain 19SMN4, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GTGCTGTTGGCCTTCCTGGTGCTGGCGGCGCAATACGAAAGCTGGAGCCTGCCGCTGGCGGTGATCCTGATCGTACCGATGACGCTGCTCTCTGCCATCA CCGGGGTGATCCTGGCCGGTAGCGACAACAACGTGTTCACCCAGATCGGCCTGATCGTGCTGGTGGGCCTGGCGTGCAAGAACGCGATCCTCATCGTCGA GTTCGCCAAGGACAAGCAGGAAGAAGGCATGGACCGGCTCGCCGCCATCCTCGAAGCCTGCCGCCTGCGTCTGCGGCCGATCCTGATGACCAGCTTCGCC TTCATCATGGGTGTGGTGCCGCTGGTGCTTTCCAGCGGGGCCGGTGCCGAGATGCGTCATGCTATGGGCGTGGCGGTGTTCAGCGGCATGCTCGGGGTGA CCTTCTTCGGTCTGTTGCTGACCCCGGTGTTCTATCTGGTGATTCGCGCCTTCGTCGAGAAACGCGAAGCCCGCAAAGCGGTTTACAAGGAGGCCCGCGC
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DNA Sequence for Gene |
>UIB01_RS10850
ATGAAGTTCTTCGCCCTTTCCCTTCTCACTCTGGCACTGAGCGCCTGCGCGGTCGGCCCGGATTACCGGGCACCGCAACCGGAACCGGCGCGCATCAGCC ATGCAGCGAGTGGCGATTACGACCGCTCGCGCTTCGAGGCAGCCTGGTGGCAACAGTTCGAAGACCCGACGCTGGATGCCCTGGTCGGCGAAGCGCTGGC CGAGAACCGCGAACTGCGCATCGCCTATGCCCGCCTGCGTGCCGCACGGGCGATCCGTGATGACGTCAGCAATGATCGTCTGCCCACTGTCACTGCCGGT GCCAGTGCCGATATCGGCAAGGCTCAGCAACCGGGCGTGACCGAGCAGCGCGTGAATGCCGAACGCTATGACCTTGGCCTGGACATGGCCTGGGAGCTGG ACTTGTTCGGCCGCATCCAGCGCCGCCTGGAATCCAGCGAGGCGCAGGCCGATGCCGTCGAAGCCGAGCTCTATCAGCTGCAGGTCAGCCTGATTGCCGA ACTGGTGGATGCCTACGGGCAGCTGCGCGGTGCCCAGTTGCGCGAGCGCATCGCCCGCGACAACCTGGCGACTCAGCGCGACTCCCACGAGCTGACAGAG CAGCTTCGCGAAGCGGGTGTAGGCAGCGAACTGGATGTGCTGCGCGCCGACGCGAGGCTGGCGGCGACCGAAGCCAGCCTGCCGCAGTTACAGGCACTGC AGGCGCGCGCCCGTAACCGCATCGCCACCCTGCTCGGCCAGCGCGCCGATCAGCTCAGCGTCGACCTTTCGCCACGCGACCTGCCGGCAATCGCCAAGGC GCTACCGATTGGCGATCCCGGCGAGCTGTTGCGTCGGCGGCCGGATATCCGTGCCGCGGAACGCCAGCTTGCCGCGGCCACGGCTGATGTCGGCGTGGCG ACGGCCGATCTGTTTCCGCGCGTGAGCCTGTCGGGCTTTCTCGGCTTCGTCGCCGGCCGCGGTTCTCAGATCGGTTCCAGCGCGGCGCGGGCCTGGGGCG TGGCGCCGAGCATCAGCTGGGCGGCGTTCGACCTCGGCAGTGTGCGGGCCCGCCTGCGCGGTGCCGAAGCCGATGCCGATGCAGCGCTGGCCAGTTATGA ACAGCAGGTCCTGCTGGCCTTGGAGGAGTCGGAGAACGCCTTTAGCGACTACGCCAACGCTCAGCAGCGCCTGCTCTCATTGCTGCGCCAGTCCACCGCC AGCCGTGCCGCCGCAAAGCAGGCGGAGATCCGCTATCGCGAAGGCACAGCTGACTTTCTCGTGTTGTTGGATGCCGAACGCGAGCGCCTGACGGCCGAAG ACGCCCAGGCGCAGGCCGAGGTCGAGCTCTATCGCGGGGTAGTCGCGCTGTACAAGGCACTGGGTGGTGGATGGGAGGTGACCGGTCAGTCACTTCGAGC CAGCACCGCGGCGATGGCCCCAGTGGAGGGACACCAGGCAAAACTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CACGGTGCCGCTCCCGTCGGGTTGGTTGGGGAAAGCGCTTTCAGTCGTCACCTATCTTTGGCATAAGGGGCGGCTGAAAGCCTAGACGCGTCCTAGCGGT CGGTCCGCATGGATGCACTGCCAACCAACCAGAATAAAGAGTCTTTCATGAAGCCGATCATTACGCTTGCCGGGGTCTTGCTGGCGCTCGCTAGCGCCTG TGCCCAGGCAGAGCCCATCGTCATCAAGTTCTCCCACGTAGTGGCCGACGACACACCCAAGGGCAAAGGTGCGTTGATGTTCAAGCGTCTCGCCGAAGAG CGCTTGCCCGGCCAGGTGCGCGTCGAGGTCTATCCCAACTCAACGCTGTTTGGTGATGCCACCGAGCTGGAAGCGCTGCGCAACGACGAGGTCCAGTTGC TCGCGCCGTCACTGGCCAAGTTCGAGCAGTACACCAAGCAGCTGCAGGTATTCGATCTGCCCTTCCTGTTCGACGACATCGAGGCGGTCAACCGCTTTCA
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Amino Acid Sequence |
>RND transporter
MKFFALSLLTLALSACAVGPDYRAPQPEPARISHAASGDYDRSRFEAAWWQQFEDPTLDALVGEALAENRELRIAYARLRAARAIRDDVSNDRLPTVTAG ASADIGKAQQPGVTEQRVNAERYDLGLDMAWELDLFGRIQRRLESSEAQADAVEAELYQLQVSLIAELVDAYGQLRGAQLRERIARDNLATQRDSHELTE QLREAGVGSELDVLRADARLAATEASLPQLQALQARARNRIATLLGQRADQLSVDLSPRDLPAIAKALPIGDPGELLRRRPDIRAAERQLAAATADVGVA TADLFPRVSLSGFLGFVAGRGSQIGSSAARAWGVAPSISWAAFDLGSVRARLRGAEADADAALASYEQQVLLALEESENAFSDYANAQQRLLSLLRQSTA SRAAAKQAEIRYREGTADFLVLLDAERERLTAEDAQAQAEVELYRGVVALYKALGGGWEVTGQSLRASTAAMAPVEGHQAKL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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