Strain | Pseudomonas stutzeri strain 19SMN4, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGTCGGGCAACGCCTACTGGAGATCTGGTCCGGTCTGCCGGTGCTCTATCTCCTGATCATTCTCGCCAGCTTCGTACAGCCGAACTTCTGGTGGCTGCTG GGGATCATGCTGCTGTTCTCCTGGATGAGCCTGGTGGATGTGGTACGCGCCGAATTCCTCCGTGGACGCAACCTCGAATACGTGCGCGCCGCCCGTGCGC TGGGCATGCAGAACGGCGCGATCATGTTCCGCCACATTCTGCCCAATGCCATGGTCTCCACCATGACTTTCATGCCATTCATCCTCACCGGCGCCATCGG CACGCTCACCGCGCTGGACTTCCTTGGCTTCGGCCTGCCTGCCGGTTCGCCGTCGCTCGGTGAACTGGTCGCCCAGGGCAAGGCCAATCTGCAGGCGCCC TGGCTGGGCATCAGCGCCTTCATGGTGCTGGCGGTCATGCTGACCCTGCTGGTGTTTATCGGGGAGGCGGCGCGCGATGCCTTCGACCCAAGGAAATAAC
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DNA Sequence for Gene |
>UIB01_RS10460
ATGGCCGAACAACCGATAGCCGAGAATCTGGTCGAGGTCCGCGATCTGGCCGTCGAATTCGTCACCGGCGATCAGGTCCAGCGAGTCGTCGAAGGCGTCA CCTTCGATATCCGCAAAGGCGAGACCCTGGCCCTTGTCGGCGAAAGCGGCTCGGGCAAATCAGTTACTGCGCACTCGATACTGCGCCTGCTGCCCTACCC GCTCGCCCGGCATCCGCAGGGGCAAATCCTGTTCCATGGCCAGGATCTGCTCAAAGCCGACGAAAAGGCCATGCGCAAGATCCGCGGCAATCGCATCGCC ATGGTCTTCCAGGAGCCAATGACCTCGCTCAACCCGCTGCACACCGTGGGCAAGCAGATCAACGAGGTATTGGAGATTCACAAGGGTCTGCGTGGCAAGG CGGCAACCGCCCGCACGCTGGAGTTGCTGGAACTGGTTGGCATCCCCGAGCCGCGCAAGCGCATCCGTGCCTACCCGCACGAGTTGTCAGGCGGGCAACG CCAGCGAGTGGTGATTGCCATGGCGCTGGCCAACGAACCGGAGCTGCTGATCGCCGACGAGCCGACCACGGCCCTCGACGTCACCGTGCAGCTGAAAATC CTCGAACTGCTGAAGGAATTGCAGGCCCGGCTGGGCATGGCGCTGCTGCTGATCAGCCACGATCTCAACCTGGTTCGACGCATTGCCCACCGCGTATGTG TCATGCAGCGCGGTCGCGTCGTCGAACAGGCGTTGTGTGAAGATCTGTTCCGTGCGCCCCAGCATCCGTACACCCAGGAACTGCTCGCGGCCGAGCCCAG TGGCGGTCCGGTGGCAGTCGAGGAAGCGGCGCCATTGCTGGAAGTGGACGACCTGCGCGTGTGGTTCCCGATCAAGAAGGGTCTGCTGCGACGCACCGTC GATCACATCAAGGCAGTCGACGGCGTCAACTTCAGCCTGCCCAAGGGGCAGACGCTGGGGATCGTCGGCGAAAGCGGTTCCGGCAAGTCCACCCTGGGCT TGGCTATCCTTCGATTGTTGGGTAGTCGCGGCGAGATCCGCTTCCAGGGTCAGCACCTGCAAAACATGTCGCAGCGCCAGGTCAGGCCGCTGCGCCGGCA GATGCAGGTGGTCTTTCAGGACCCCTTTGGCAGTCTGAGCCCACGCATGTCGGTGGGGCAGATCGTTGGTGAAGGGTTGCACATCCACCGGATGGGCAAT GCCAAGGAGCAGGAACAGGCAATCATTGAGGCGCTCGTGGAGGTTGGTCTCGATCCGGAAACCCGGCATCGCTACCCCCATGAGTTTTCCGGCGGACAAC GGCAGCGTATTGCCATTGCCCGGGCTCTGGTGTTGAAGCCGGCGCTGATACTGCTCGACGAGCCGACCTCCGCGCTCGATCGCACGGTGCAGCGCCAGGT GGTGGAGCTTCTGCGCTCGTTGCAGGCCAAGTACAACCTGACCTACCTGTTCATCAGCCATGACCTGGCGGTGGTCAGGGCGCTGAGCCACCAGATGATG GTGGTCAAGCAGGGCCAGGTGGTGGAACAAGGTGCGGCCGCTGACATCTTTGCGGCACCGCAACATCCGTATACACAGCAGCTGCTGGAATCCGCCTTCA TGGCGCCCGGCACTGCCGAACAACCAGAAGAGGGACAAGCACATGGGTTTTCTCACCGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGCGTACTGATCGTCGGCGTTGCCAGCAAACTGTCGATTGCCTCGGGCATCGCCGCGGCCATGCATCGCGAAGGTGCAGAACTGGCTTTCACCTACCAG GGCGACAAGCTCAAGGGTCGCGTCGAGGAATTCGCTTCCGGTTGGGGTTCGAGCCCTGAGCTGTGCTTCCCCTGCGACGTTGCCAACGATGAAGAGATCG CGCGCGTATTCGAAGAACTGAGCAAGAAGTGGGACGGCCTGGATTGCATCGTGCACTCCGTCGGCTTTGCTCCGGGCGACCAGCTCAACGGCGACTTCAC CGAAGTCACCACCCGTGAAGGCTTCAAGATCGCCCACGACATCAGCGCCTATAGCTTCGTTGCCCTGGCCAAGGCCGGTCGCGAGATGATGAAGGGCCGC AATGGCAGCCTGCTGACCCTCTCCTACCTGGGTGCCGAGCGCACCATGCCGAACTACAACGTGATGGGCATGGCCAAGGCCAGCCTGGAAGCCGGCGTCC
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Amino Acid Sequence |
>microcin ABC transporter ATP-binding protein
MAEQPIAENLVEVRDLAVEFVTGDQVQRVVEGVTFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARHPQGQILFHGQDLLKADEKAMRKIRGNRIA MVFQEPMTSLNPLHTVGKQINEVLEIHKGLRGKAATARTLELLELVGIPEPRKRIRAYPHELSGGQRQRVVIAMALANEPELLIADEPTTALDVTVQLKI LELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGRVVEQALCEDLFRAPQHPYTQELLAAEPSGGPVAVEEAAPLLEVDDLRVWFPIKKGLLRRTV DHIKAVDGVNFSLPKGQTLGIVGESGSGKSTLGLAILRLLGSRGEIRFQGQHLQNMSQRQVRPLRRQMQVVFQDPFGSLSPRMSVGQIVGEGLHIHRMGN AKEQEQAIIEALVEVGLDPETRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQAKYNLTYLFISHDLAVVRALSHQMM VVKQGQVVEQGAAADIFAAPQHPYTQQLLESAFMAPGTAEQPEEGQAHGFSHR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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