Pseudomonas stutzeri 19SMN4, UIB01_RS10215
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain 19SMN4, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGGACGTTCTGGACTGACTGCATCACGTTTCCTCCGTCTTTACGAGCGATGTAGTGCCATAAAAAAAACACTACAAAACGATTGACGATGCCAATTCAGC GGAGCATTATTGCCCCGCTCCCGCTAACCAGGGGCCCTGGCAAGGGTCTCCGGGGCGTGCTCAAGCCAACCAGCCGAGCCGTTCCGTGACTGTACTGCCC ACAAGGCGGACTGACGAGGTTGCGACTGGAACGAGTCGTCCTGAGGGACGGGGTAGCGATTGACGCATCAGCCAGACTGACAGCTTTTCGTTGTTGTAAC GCACACGGCAGCCACGCCGGCTGTGGGCGCAACAAGCGGAACCAGCCCGGCGATCGTATCCCCCCTTCTCTTGGTTCAATCCTCGTCCCGGTCGATATTT CGACGCTCTGCCGCGTGTTGCCCGCAATGATCAGCGATAGCACGTAGGTTTCGGTGGGAAAAGTCGGTGCTCAACCACACTCATTTTTGAAGGATTGAAC
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| DNA Sequence for Gene |
>UIB01_RS10215
ATGTCCGCATATCAAGACGACATCAAGGCAGTTGCCGCCCTGAAAGAGCAATACGGCAGCAGCTGGGCCGCCATCAACCCTGAGTCCGTCGCTCGCATGC GCGCCCAGAACCGCTTCAAGACCGGTCTGGAGATTGCTCAGTACACCGCCGACATCATGCGCAAGGACATGGCCGAGTACGACGCCGACTCGTCCGTCTA CACGCAGTCCCTTGGCTGCTGGCATGGCTTCATCGGCCAGCAGAAGCTGATCTCCATCAAGAAGCACCTGAAGACCACCAACAAGCGCTACCTCTACCTG TCTGGCTGGATGGTTGCTGCTCTGCGCTCCGAGTTCGGCCCGCTGCCGGACCAGTCCATGCACGAGAAGACTGCCGTTTCCGACCTGATCGAAGAGCTGT ACACCTTCCTGCGTCAGGCTGACAGCCGTGAACTGGACCTGCTGTTCACCGCTCTGGACGCCGCTCGCGAAGCCGGCGACGGCGCCAAGGCTGCCGAGAT CCAGAACCAGATCGACAACTACGAAACCCACATCGTACCGATCATCGCCGACATCGACGCTGGCTTCGGTAACCCGGAAGCCACCTATCTGCTGGCCAAG CGCATGATCGAAGCGGGCGCTTGCTGCATCCAGATCGAAAACCAGGTTTCTGACGAGAAGCAGTGCGGCCACCAGGACGGTAAAGTGACCGTTCCTCACG CCGACTTCCTCGCCAAGATCGCAGCCGTACGTTACGCCTTCCTCGAGCTGGGTATCGACAACGGCGTGATCGTTGCTCGTACCGACTCCCTGGGTGCTGG CCTGACCAAGCAGATCGCCGTGACCAAAGAGCCGGGCGACCTGGGCGACCTGTACAACTCCTTCCTCGATTGCGAAGAAGTCTCCGAAGCCGCACTGGGC AACGGCGACGTCGTGATCAAGCGCGAAGGCAAGCTGCTGCGTCCCAAGCGTCTGCCGTCCAACCTGTTCCAGTTCCGTGCTGGCACCGGTGAAGCTCGCT GCGTACTGGACTGCATCACCAGCCTGCAGAACGGCGCCGACCTGCTCTGGATCGAAACCGAGAAGCCGCACGTTGGGCAGATCGCGGCCATGGTTGACGA AATCCGCAAGGTCATCCCGAACGCCAAGCTGGTTTACAACAACAGCCCTTCCTTCAACTGGACCCTGAACTTCCGCCAGCAGGTGTTCGACGCCATGGTT GCCGAAGGCAAGGACGTTTCCGCCTACGACCGCGCCAAGCTGATGAGCGTCGAGTACGACGAAACCGAACTGGCTCAGGTTGCTGACGAGAAGATCCGCA CCTTCCAGCGCGACGGTTCGGCCCACGCCGGTATCTTCCACCACCTGATCACCCTGCCGACTTACCACACAGCGGCCCTGTCCACCGACAACCTGGCCAA AGGCTACTTCGCCGACCAGGGCATGCTGGCCTACGTGAAGGGTGTCCAGCGTCAGGAACTGCGTCAGGGTATCGCCTGCGTCAAGCACCAGAACATGGCT GGTTCCGACATCGGCGACAACCACAAAGAGTACTTCGCTGGCGAAGCTGCTCTGAAGGCAAGCGGTAAAGACAACACCATGAACCAGTTCCACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAACGGGTTCGCAGCCTTCATAGCTGCGGTGTAGTGAAAAAGCCTCGGCCCATGCGCCGAGGCTTTTTTTTCAGCCAAAAAAGTGCCGCGCGCCGGCGCT TCGTCGGCCAAATACACAACTGTCATTCTGCTGTCGCATATGCAATTTAGCGTCATGGCTCCGACAACAAATCGTTATGGAGCTGCGCCGTGATTACTGA GAACAACGACATTCTGTTCGGCAACGGGGACGAGTTGCCCAGTAACCATTCAACGAACCCGCATATTCAGGATGTGATCTCCATTGGTCGCCGAAAAGTG CTCGCCGGCGGCGCAGCAATCGGCGCCCTGGCGTTTCTTGGCGCGTCGCTTCCGGGCCTCGTACAAGCAGCCGAGCCGGCAGCGCGGGGACTCAAGGATA TTCCGTTCAAGCGCCGTACCCGGCTGCCCTTCACGCCGGTTGCAGTTACTCGGGCAGATGCCATCACGGTACCTGCCGGCTACTCTGCCACCACCTTCAT
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| Amino Acid Sequence |
>isocitrate lyase
MSAYQDDIKAVAALKEQYGSSWAAINPESVARMRAQNRFKTGLEIAQYTADIMRKDMAEYDADSSVYTQSLGCWHGFIGQQKLISIKKHLKTTNKRYLYL SGWMVAALRSEFGPLPDQSMHEKTAVSDLIEELYTFLRQADSRELDLLFTALDAAREAGDGAKAAEIQNQIDNYETHIVPIIADIDAGFGNPEATYLLAK RMIEAGACCIQIENQVSDEKQCGHQDGKVTVPHADFLAKIAAVRYAFLELGIDNGVIVARTDSLGAGLTKQIAVTKEPGDLGDLYNSFLDCEEVSEAALG NGDVVIKREGKLLRPKRLPSNLFQFRAGTGEARCVLDCITSLQNGADLLWIETEKPHVGQIAAMVDEIRKVIPNAKLVYNNSPSFNWTLNFRQQVFDAMV AEGKDVSAYDRAKLMSVEYDETELAQVADEKIRTFQRDGSAHAGIFHHLITLPTYHTAALSTDNLAKGYFADQGMLAYVKGVQRQELRQGIACVKHQNMA GSDIGDNHKEYFAGEAALKASGKDNTMNQFH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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