Pseudomonas stutzeri 19SMN4, UIB01_RS10095
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain 19SMN4, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AAGTGCCTCGTTGACTGCCAGCCAGCCATCCACGGCTTGCTCGCCGACATCATCGAAGGCCCGTTGAAGCAGACGGACCTGTTCCTTGCGCAAGGCCTGC TCTAACTTCGCCCCCTCTGCGGTAAAGCGCAGCATGCGCTTACGCTTGTCATCTGCTGCCGTAAGGCTCTCCACCAGATGCATTTCGATCAGCTGGCGTA GCGGTGTGTTCAGCGCCTGCTTGGAGACACCGAGATAGCTCAGCAACTCCTTGACGCTCAGGTCCGGGTAGCTGGCGATGAAGAACAGGATGCGGTGATG CACGCGTGACAGGCCTCGACGGGCCAGCATCTCGTCAGGCTTGGCCGTGAAGGCCTGATAGCCGAGAAAGAAGCTTTCCATTATCTGGCGCTGCACTGCG CTTTTTTTTAGGTCAGGCATATTGACGTATTTATTGTGAGAGGCGTAATTTCGGTCAAGAAGTTTGACTTATTTTGCAGCGCCTCGCATCTGGTATGGAA
|
|
| DNA Sequence for Gene |
>UIB01_RS10095
ATGGCCTTCTCCGAACGCATTACTCGCCTTAAAAGTTCTCTCATTCGTGAAATTCTCGCCGCAGCCCAGCGCCCGGAAGTGATGTCCTTTGCCGGTGGGC TGCCGGCGGAGGCGATGCTGCCGACGGTCGATTGGGCTGAATTGCCGGCAAGCATGGGACAGTATGGGATGAGCGAAGGCGAGCCCGCTCTCCGTGAACT CATTGCCGCCCAGGCGCGGGCGCTTGGCGTGCCTTGCGAAGCCAGTCAGGTGTTGATCGTCAGCGGCTCGCAGCAGACGCTGGATCTCGCGTCGAAGCTC TTTATCGACTCAGGAACAGAGGTGCTGGTCGAGGCGCCAACCTATCTCGCTGCTCTACAGTCCTTTCAATTGTTCGGAGCTGAATGTCTGGCAGTTCCCC AGCAGGCCGATGGTCCGGATTTGGCCGCCCTGCGCGCAACGCTGGAGCAGCACGAGCCTGCTTTCGCCTATCTGATTCCTACGTTTCAAAATCCATCCGC TGTTCGCTACAGCGAAGCCAAGCGTGATGCGGTCGCTGCGTTGCTGGATGAGTTTGGCGTGACACTGCTCGAGGATGAGCCATATCGTGAGCTGGTATTC GATCAGGGCAGTGCCAAGCCGATTGTCTCGCGTCTGAAACGAGCGAGCTGGATCTACACCGGTACGGTTTCCAAGACGCTGCTGCCGGGCTTGCGGGTGG GGTATCTGATCGCCTCGCCGGACCTTTTTCCTTATTTGCTGCGGCTGAAGCAGTCGGCTGATCTGCACACCAACCGGATCGGACAATGGCAGGCGTTGCA GTGGTTGGGTAGCGACCGTTATCAGGAGCATCTTGGGGAGCTGCGAGACTTTTATCGTATTCGCCGTGACGCCATGCAGGATTCGCTCGAGGAGCATTTC GGCGATCTGGCGACCTGGGAACTTCCGCAAGGCGGACTGTTCTTCTGGCTCACTCTGCGGCAGCCGCTGGATACCCGGACGCTGCTCAAACAGGCTCTCG CGGAGGATGTGGTGTTCATGCCCGGCGAGCCTTTCTTCGTCGATCCTGAAGCAAACCCCGGTTATCTGCGATTGAATTTCAGCCATGTTTCGGCTGAACG GATGAGTGAGGGGTTGCGCCGGTTGGCGCAGGTCATCCGTGATGCCAGCGCATCGGAAGCTGCTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGACATTGCATAACCCGCACCGCGGGTTTATCGGAGGGGAGACCATGTTGAAAGTCTATGGCGATTACAGGTCGGGTAATTGCTACAAGATCAAGCTGAT GCTTCATCTGCTGGACCAACCTTATGAATGGATTCCGATCAATGTCCTGCGGGGCGAATCCCGCTCCGAGGAGTTTCTCAAGAAGAATCCGAACGGCAAG ATTCCGGTTCTGGAGCTGGAAGATGGCACTTGTCTGTGGGAATCCAACGCCATCCTGAACTATCTCGCCGAGGGAAGTGAGTTCCTGCCGACGGATCCAC GCTTGCGCACTCAGGTGCTGCAGTGGCAGTTCTTCGAGCAGTACAGCCACGAGCCCTTCTTGGCAGTGGCCCGTTACATCAAGGTCTACCTCGGTATGCC GGAGGACCGACGCGAAGAGTACGAGGCCAAGCAGCTGGACGGCTATCACGCACTGAACGTGATGGAGCAGCAACTGCTGCGAACGCCTTACCTAGTCGGG
|
|
| Amino Acid Sequence |
>GntR family transcriptional regulator
MAFSERITRLKSSLIREILAAAQRPEVMSFAGGLPAEAMLPTVDWAELPASMGQYGMSEGEPALRELIAAQARALGVPCEASQVLIVSGSQQTLDLASKL FIDSGTEVLVEAPTYLAALQSFQLFGAECLAVPQQADGPDLAALRATLEQHEPAFAYLIPTFQNPSAVRYSEAKRDAVAALLDEFGVTLLEDEPYRELVF DQGSAKPIVSRLKRASWIYTGTVSKTLLPGLRVGYLIASPDLFPYLLRLKQSADLHTNRIGQWQALQWLGSDRYQEHLGELRDFYRIRRDAMQDSLEEHF GDLATWELPQGGLFFWLTLRQPLDTRTLLKQALAEDVVFMPGEPFFVDPEANPGYLRLNFSHVSAERMSEGLRRLAQVIRDASASEAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|