Pseudomonas stutzeri 19SMN4, UIB01_RS08845
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain 19SMN4, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCATGAACGGTTGGCTTCCATGCCGATCATCATGCTCACCGCCAGCTCCGACGAGGCCGATCGGGTCGTCGGCCTGGAGCTGGGTGCCGACGATTACCTG GGCAAACCCTTCAGCCCGCGCGAGTTGCTGGCGCGGATCAAGGCATTGCTGCGGCGGGTCAGCTTCGCCCAGGAGCGTGGCAGCGATGTGCTGGCCTTCG ACGAGTGGCGGCTGGACATGATCAGCCACCGTCTCTTTCACGCCGACGGCGAAGAAGTCTTTCTCTCTGGCGCCGATTTCGCCTTGCTCAAGCTGTTTCT CGACCATCCGCAGCAGATCCTCGACCGCGACACCATCGCCAACGCCACGCGCGGCCGCGAGGTGATGCCGCTGGAGCGCATCGTCGACATGGCGGTCAGC CGTCTGCGCCAGCGCCTGCGCGACACCGGCAAATCGCCGCGGCTGATCCGCACCGTGCGTGGCAGCGGCTATCTCTTGGCCACCCAGGTAACGCCGCACC
|
|
| DNA Sequence for Gene |
>UIB01_RS08845
ATGAATCTGCGCACTGAGCGGCGGCGCCTGCGGCTGGTGCCGCGCTCGCTGCTCGGACGGATGCTGCTCCTGACCCTGCTGGCGGTGTTGCTGGCTCAGG GCCTGTCGAGCCTGATCTGGCTGTCACAGCTGCGCGCCAGCCAGATGGAGGGCCTGCTGACCAGCGCCCGCAGCCTGGCGCAGTCGATGGCCGCCAGCGT CAGCTATTTCCGTTCCCTGCCGCTGGGTTATCGTCCGCTGGTACTCGATCAGTTGCGCAGCATGGGCGGCACGCGCTTCTTCGTCTCGCTCAACGACAAT CCGCTGGACATGAAAATCCTCCCCGAAACGCCGCGCAAGCGGGCCGTCCTGCATGAGGTGGAGCAGGTGTTGCGCCAACGGCTCGGTGGCGAGGTGGACC TGACCATCGAGTTCGTCAGCCCGGACGACCTGCGCATCTTCAACAGCGGCATCAAGCTCGATGAACTGCCGCGCTCCTGGGCGCACTACGCGCTGGGGCT GGAGCCGCTGTCGCCACCGGTACTGGTGACGCAGATCCAGATCGCCCCGCAGGAGTGGCTCTATCTGGCCTCGCTGATGCCGGCACCCTACGTCAGCCTG GAAGACGAGGGTCTGCCGATTCAGCAGCTGTGGTTCATTGTGCTCACCAGCGCCTTTCTGCTGCTGTTCATTGGCTTGCTGGTGCGCTGGCAGAGCCGGC CGCTGAAGCGCTTGGCCAAGGCGGCGCGGGAGATGTCGGTAGGCGGCGAAGTGCGGCCTCTGACCGAGGCCGGGGCCAGTGAGATCGTCGAGGTGAGTCG CGCCTTCAACAACATGCGCGAGCGCATCAGCCGCTACCTGACCGAGCGCGGCCAGTTGTTCAGCGCGATTTCCCACGACCTGCGCACGCCGATCACGCGG CTGCGTCTGCGCGTCGAGCTGCTGGAGGATGAAGCCCAGCAGATCAAGTTCACCCGTGACCTCGACGAGCTGGAGTTGCTGGTCAAGGGCGCGTTGCAAT GCGTGAAGGACACCGATATTCACGAGAACGTCGAGGCGGTGGATCTCAATCTGCTCCTCGAGCACATCGTCGAGCCGTATCAGGCCTGTGACCGCACCCG CGTGACCCTCGACGGCCACGCTTCGGCGCCTTATCCCGGCAAGCCACTGGCGCTCAAGCGCTGCATTGGCAATTTGCTGGATAACGCCTTGAAGTACGGT GAGCGCGCCCACCTGCATGTCGAGGATGGCAAGGACGCGCTGGTGCTGCACGTCGATGATGAGGGCCCCGGTGTGCCGGAACAGCGTCTCGAACAGGTCT TCGAGCCCCACGTGCGGCTCTCGGGGCAGCAGCAGGGCTACGGGCTAGGCCTGGGTATCGCGCGCAACATCGCCCATGCCCACGGCGGCGAGCTGAGCAT GCGCAATCTGCAGCAGGGAGGGCTGAGGGTAACCCTGACTCTGCCGCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTCCTGCGTCCGCCCCGCGTTACCTGAAGCGTCCCTTTGTAACGGCCTCGTGACCATCGGCCATCCCTTCGTTACCCAGTGTCCATTTTTCTGCGCATAG ACTCGATCCATCGCAAGCGACCATGACTTGCAGGATAAAAACAAGAAGGTGCCCCTCCATGAATGCGTTCCATCGTCTCGCTCTATCCGTTTCCCTTGCC CTGCCTGTACTCGCCCACGCTGGTGAAGTCGAAGTTCTGCACTGGTGGACCTCCGGCGGTGAAAAGCGCGCGGCCGATACCCTGCAGAAGCTGGTCGAGC AGAAAGGCCACAGCTGGAAGGACTTCGCCGTCGCCGGCGGTGGTGGCGAGGCTGCCATGACCGTACTGAAAACCCGCGCCGTTTCCGGCAACCCGCCATC CGCCGCACAGATCAAGGGCCCGGACATTCAGGAGTGGGGCGAACTCGGCCTGCTCGCCAACCTCGATGACACCGCCAAGGCCGAGCGCTGGGACGAACTG
|
|
| Amino Acid Sequence |
>histidine kinase
MNLRTERRRLRLVPRSLLGRMLLLTLLAVLLAQGLSSLIWLSQLRASQMEGLLTSARSLAQSMAASVSYFRSLPLGYRPLVLDQLRSMGGTRFFVSLNDN PLDMKILPETPRKRAVLHEVEQVLRQRLGGEVDLTIEFVSPDDLRIFNSGIKLDELPRSWAHYALGLEPLSPPVLVTQIQIAPQEWLYLASLMPAPYVSL EDEGLPIQQLWFIVLTSAFLLLFIGLLVRWQSRPLKRLAKAAREMSVGGEVRPLTEAGASEIVEVSRAFNNMRERISRYLTERGQLFSAISHDLRTPITR LRLRVELLEDEAQQIKFTRDLDELELLVKGALQCVKDTDIHENVEAVDLNLLLEHIVEPYQACDRTRVTLDGHASAPYPGKPLALKRCIGNLLDNALKYG ERAHLHVEDGKDALVLHVDDEGPGVPEQRLEQVFEPHVRLSGQQQGYGLGLGIARNIAHAHGGELSMRNLQQGGLRVTLTLPR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|