Strain | Pseudomonas stutzeri strain 19SMN4, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TGAGATGGTCCGCGTGCCATGGACTGCCGACGATCTGGCGCGCTTTACCCGTCTGGTGCAGGACTCCGTGGGCTTCGATGCAAGCCGCGGCGACAGCGTC AGCGTGATCAACACGGCATTCGTGGCCGACAGTTTTGGCGAAACCTTCGAAGAGATTCCGTTCTATTCGCAACCCTGGTTCTGGGACATCGTCAAGCAGG TGCTCGGCGTGCTGTTCATCCTGGTGCTGGTGTTCGGTGTTCTGCGTCCGGTGCTCAAGAGCCTGACCAACCCCACCAGTGGCAAGGAGCTGCAAGTCGC CAATGGTCCGGGTGATCTGGGCGACGAGGAAGGCCTGGAGTCGGGCCTGTCGAATGACCGGGTCAGCCTGAGTGGCCCGCAGAACATCCTGTTGCCAAGC CCCAGCGAGGGATATGAAGCCCAGCTGAACGCGATCAAGAACCTGGTGGCCGATGACCCGGGACGGGTAGCCCAGGTGGTGAAAGAGTGGATCAACGCCG
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DNA Sequence for Gene |
>UIB01_RS07955
ATGAGTGACAATCGAGTTCAAGCCAAGCTCAACAAGGTCGACAAGGCCGCCATTCTACTGCTCTCGCTGGGTGAAACCGATGCCGCGCAGGTTCTGCGCC ATCTCGGTCCGAAGGAGGTGCAGCGGGTCGGTACTGCCATGGCACAAATGCGCAATGTGCAGAAAGTCCAGATCGAACAGGTGATGAGCGAATTCGTCGA GATCGTCGGTGATCAGACCAGTCTGGGTGTGGGCTCCGATGGCTACATCCGCAAGATGCTCACCCAGGCACTGGGCGAGGATAAAGCTGGTGGGCTCATC GACCGTATCCTGCTGGGCGGCAATACCAGTGGTCTGGATAGCCTCAAGTGGATGGAGCCGCGTGCAGTGGCCGACGTGATCCGCTACGAGCACCCGCAGA TCCAGGCCATCGTGGTGGCCTATCTCGATCCGGATCAGGCCGGCGAAGTGCTCTCGCACTTCGACCACAAGGTGCGACTGGATATCGTGTTGCGCGTTTC CTCGCTCAATACCGTGCAGCCGGCTGCGCTGAAGGAATTGAACCTGATATTGGAAAAGCAGTTCTCCGGCAGTACCAACACCAGCCGGGCCAGCCTGGGT GGCGTGAAGCGTGCCGCAGACATAATGAACTATCTGGACAGCTCCATCGAAGGCCAGCTGATGGACGCCATTCGCGACGTGGACGAGGATCTGTCCAGCC AGATCGAGGACCTCATGTTCGTCTTCGACAACCTCGCCGAAGTCGACGACCGTGGCATCCAGGTGCTGCTGCGTGAGGTATCCTCCGATGTGCTGGTGAT GGCGCTCAAGGGCGCCGACGACGGCATCAAAGAGAAGGTCTTCAAGAACATGTCCAAACGCGCCGGCGAACTGTTGCGCGATGATCTGGAAGCCAAGGGT CCGGTGCGCGTCAGCGATGTCGAAAACGCGCAGAAGGAAATCCTTACCATTGCTCGCCGCATGGCCGAGGCCGGAGAAATCGTTCTGGGCTCCAAGGGCG GCGAGGAAATGATCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCAGGTACGAATCCCTCACATGGCCAAGGACAACCCCAGCGACGTCATTCGTGCGAAAGATGTCAGCCTGTTCGATCGCTGGTCTTTGCCCAGTTTCGAT CCGCAAGGTGAGGAACAGGTGGTGCCTGCGGTTCAGGCCGTGGAGGAACCTGTTGAAGAGTTGGCGCGTAGCGAAGACGTGCCGGTCGAGGAAGTCAAAC CGCTGACGCTCGACGAGCTCGAAGCGATCCGCCAGCAGGCCTACAACGAAGGTTTTGCTACTGGAGAGAAAGACGGCTTTCACGCCGGGCAGCTCAAGGC GCGGCAGGAAGCCGATGCGGCGCTGGCGCCACGGGTGGAGAGCCTGGAACGGCTGATGGAGCAGTTACTCGATCCGATCGCCGATCAGGATCGTAATCTA GAGCACGCCATGGCCACCCTGGTCAGCCATATGGCGCGCGAGGTGATTCAGCGCGATCTGTTGATCGATTCCAGCCAGATTCGCCAGGTATTGCGCGAAG
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Amino Acid Sequence |
>flagellar motor switch protein FliG
MSDNRVQAKLNKVDKAAILLLSLGETDAAQVLRHLGPKEVQRVGTAMAQMRNVQKVQIEQVMSEFVEIVGDQTSLGVGSDGYIRKMLTQALGEDKAGGLI DRILLGGNTSGLDSLKWMEPRAVADVIRYEHPQIQAIVVAYLDPDQAGEVLSHFDHKVRLDIVLRVSSLNTVQPAALKELNLILEKQFSGSTNTSRASLG GVKRAADIMNYLDSSIEGQLMDAIRDVDEDLSSQIEDLMFVFDNLAEVDDRGIQVLLREVSSDVLVMALKGADDGIKEKVFKNMSKRAGELLRDDLEAKG PVRVSDVENAQKEILTIARRMAEAGEIVLGSKGGEEMI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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