Strain | Pseudomonas stutzeri strain 19SMN4, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
AGGACCTTTCCGGCGGTGAGCGCGGTCGTCTGCACCTGGCGCTGACCCTCAAGCAGGGCGCCAACGTGCTGCTGCTCGACGAACCCTCCAACGACCTCGA CGTGGAAACCCTGCGCTCGCTGGAAGAGGCGCTGCTGGACTTCCCCGGCTCGGCCATCGTGATCTCCCACGATCGCTGGTTCCTCGACCGCGTCGCCACC CACATCCTCTCCTACGAGGACGATGGCGGTGTCGTGTTCTTCGAAGGCAACTACACCGAGTACGAAGCCGATCGCAAGAAGCGTCTGGGTGATGCCGCCT CCCAACCACACCGGGTCAGGTACAAGAAGCTGGCGCAGTAATTGCACCAGAGGAGCGGAGCCATGTGGCTCCGCTCTTGCGTCAGAAAGACGACAATCCG CTAGTAGCAAAAAGCCTTATGACGGATAATTGCCGCCCTCTTAAACCCGGCGCGACAATCATCTACCGCGCCATGACCTAGCGACAGAGGGAACCTTCGC
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DNA Sequence for Gene |
>UIB01_RS04105
ATGGCAGCCTTGGGATTGCGCGGCAAATCACTGCTGGTCTTGTTGCTGAGCTGCCTTCTTGCCTTCGCCTTTGCCGGGTTCATCGCTCGTGAAGCGCTGC TGGGCGTCCAAAGCCGCTTCGGCGAAGCCTATGCACGTAATGTGGTGCAGCTTAACCGTGAGCGTCTGTTCGCCCCGGTTTCGCGTGAGCTGGCGCTTGC CCAGCGGCTCGCGGCCTCACAACTGACGGTCGCCTGGCTGCACGACGAGGACACTCCAGCCAAGCGCGACAGCTTCTTCAAGGAAGCGGCAGGCTATCAG CAAGCCTTTGGTGATCACGCCTATTTCGCCGCCTCGGCGCAGAGCAACAGCTACTACTCCAACGGACCAAACCAGGCGCCCTCCGATGCCCCTCGCTATG CGATGGACCCGGAGAGTTCGCGTGATGAATGGTTTTTCCAGACGCTGCAAAGCGAAGTCCCCCACGCCATAAACGTCGACCGTTCCGTGGTCACCGGCGA ACTCAAGGTCTGGTTCAACGTGCAGGTGCGCGACGGCGCCCGCCGCCTTGGCCTGGTCGGTTCCGGCATCAGCCTGCAGGCTTTCCTCGACGACTTCATC GAAGCCAACAAGGTCGGTGTCGAGTCGATGGTGCTTGACGCTTACGGTTCGATCCTCGTGCACCCGAACCAGAATCTGGTCACGCTGAACGCCGACACCG CTCGCGGACGATCTCTGTCGACGAGCATTCTCGGCCTGCTCGACGATCTCAGCGCGGCGTCGGCGGTACGTCAGGCCATGGCCGCGAGCCGCGACAGCCC GGGCAGCGTGGCGACGGTTCGGGTCGCCCTGGACGGCGCGCCCCGGCTGCTGGCACTGAGCTGGATTCCGGAACTGCAGTGGTTCGTCGCCAGCTCTGTG GATCTGAGCACAGCACAGGTCGTCGAGGTACGCCCGCTACTGCCGGCCATCGGCTTGTTTCTGGTGTTGTTCCTGCTGCTGATCGGCGGTGGCGCCTGGC TGGTGGAGAAGCGCGTGCTCAAACCGCTGCGCCAGCTACGACGCAGCGCCCAGGCCCTGGCTGCGGGGCAGTACGATGCGCCCCTACCGCTGCATCGTCA GGACGAAATCGGCGAACTCAGCGCAGCCTTCGGCGCCATGGCGCAGCAGGTTCGCAGCCACACCAGCGAACTGGAAAATCGCGTACGCGAGCGCACACGC GATCTGGAGCGGGCCAATCTGGAAATGGCCGCCGCGCACAAGAAGATCGACGATTCGATCGACTACGCCAGCCTTATCCAGCGTGCGATCTTGCCCAACC GACAGCTGGTCACGGCCATGGGCGACCGCCATGCCGTGCTCTGGCGGCCACGCGATGTTGTCGGCGGCGACTTCTATGTCTATCGCGCCGACGAGCACGG CTGCCTGTTCGGCGTCGTCGATTGCGCCGGCCATGGCGTGCCGGGCGCTTTGATGACAATGCTGGCCCACGCCGCCATCGACCAGGCGCTTGGCACAACC GGCCTGGACGACCCCGCAGCCGCGCTCTCGCGCACCGATGCAATCGTGCGCAATATGCTGCGCGAAGAGCCGGGTTCCCATGCCCTGGCCACGAACATGG ACATCGGTCTGGCCTATGTCGATTTGCGCCAGCGCAAGGTGCATTATTCCGGCGCGAAGATTGCTCTGTATTACTGTGATGGCGAAGAGGTGCACGAAAT AAAGGCAGCGCGGCGCGCCATCGGCGATAAACGCATTGGCGAGTACCGCAATACCAGCGTCGACCTGCAACCTGGGCGCACCTTCTACATGACCACCGAT GGTTTCCTCGACCAGGCTGGCGGCGAAGAAGGCTATGGTTTCGGCAACAGCCGCTTCGCCAGCATGATTCGCGAGCACGCGCGGCTGCCCCTGGCCGAGC AGGGCGAAGCCTTCAGCCTTGCGCTGGCGCGCTATCAGGGTGAATTCCCGCAGCGCGATGACATCACGATGTTATGTTTCCGTTTCGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GACAGGGAGTTGGCCATGGGCCCCATTGACATGTTCGCGATGCGCGAATGCTACAACCAGCAACAGATCATGCTCTGCTTCAACGGCCCCATCTCCCGCA GCCTGATCGAAGAGATCGGCAATGCCCTGCGCAACTACATGAGCGAAGAGCAGGCGCACCCGTCCTCGGCCATGGATGTGTTCGCCGTCTACATCGAGAT GACGCAGAACATTCGTCATTACACCCGTGAGAAGAATTGGTCCGATCAGCAGGCCGGGGCCACGGTCGTGGTGTCGCGCGACGATCAGGGCAGATATGTC GTCTCGGCCGGCAACCTGATCGAAACTGCCGACGGCCAGCTGCTGCTCGCCGCCATCGCCGAGCTGGCACAAAAGGACAAGGCCGGGCTGAAAGCGCTGT ACAAGGAACAGCTGCGCAGACCGCGCGACGAACACGTGACCTCCGGCGCCGGGCTCGGCCTGATCGACATCGCCCGCAAATCCAGCGAGCCGCTCAAAGC
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Amino Acid Sequence |
>histidine kinase
MAALGLRGKSLLVLLLSCLLAFAFAGFIAREALLGVQSRFGEAYARNVVQLNRERLFAPVSRELALAQRLAASQLTVAWLHDEDTPAKRDSFFKEAAGYQ QAFGDHAYFAASAQSNSYYSNGPNQAPSDAPRYAMDPESSRDEWFFQTLQSEVPHAINVDRSVVTGELKVWFNVQVRDGARRLGLVGSGISLQAFLDDFI EANKVGVESMVLDAYGSILVHPNQNLVTLNADTARGRSLSTSILGLLDDLSAASAVRQAMAASRDSPGSVATVRVALDGAPRLLALSWIPELQWFVASSV DLSTAQVVEVRPLLPAIGLFLVLFLLLIGGGAWLVEKRVLKPLRQLRRSAQALAAGQYDAPLPLHRQDEIGELSAAFGAMAQQVRSHTSELENRVRERTR DLERANLEMAAAHKKIDDSIDYASLIQRAILPNRQLVTAMGDRHAVLWRPRDVVGGDFYVYRADEHGCLFGVVDCAGHGVPGALMTMLAHAAIDQALGTT GLDDPAAALSRTDAIVRNMLREEPGSHALATNMDIGLAYVDLRQRKVHYSGAKIALYYCDGEEVHEIKAARRAIGDKRIGEYRNTSVDLQPGRTFYMTTD GFLDQAGGEEGYGFGNSRFASMIREHARLPLAEQGEAFSLALARYQGEFPQRDDITMLCFRFD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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