Strain | Pseudomonas stutzeri strain 19SMN4, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
AGGTCAACGACACCTTCGGCCACCCCATGGGCGACCGGGTCATCAAGAGCCTGGCGCTGTTCCTTAAACAGCGTCTGCGCAAGACTGACCACATCGGCCG CTACGGCGGCGAAGAGTTCGCCGTGGTGTTGCCTGACACGCCGGCAGAAGCGGCCTGCAAGGTGCTGAACGAGATCCGTCAACGCTTCGCCGAGATTCGC TTCCCGGCCCAGCCGCAGGATCTGAGCTGCACCTTCAGCTGCGGCATCACCGAGCTGACAGGCGATGCCGAGGTCAAGACACTCACCCAGCAAGCCGACG AGGCGCTCTATCGCGCCAAGCACGGCGGCCGCAACCGCGTCGAGCGCTACTGACCCGCGACCCACCTCACCGCCTGGGCCGGACGCGCCGTTTTCATCCC GATCGCTGCAGCGCAGCCTCGGGAGACCCGCCAGCTGTAACGCAAATGACATCAAACTGCCATACCTTGCAGGCCTCTTGATCTGTTCTGCGAGGCGAGG
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DNA Sequence for Gene |
>UIB01_RS02945
ATGCGCCTGAAGTCGCTCACCACTCTCAATACAATGCTGCTAATTGCAGTCTGTCTGGCGCTTGGCGTCACGCTCTGGTGGTCCGAGCGCGCCATGGAGC GCCCGTATCTGCTGATGGCGCGTTATCTCGCGCTCTCTCAGCAGTTCCAGCACCATGCCGCGGAAAACATCCATGGCTATCTCGCCACGGGTGACGCACT GCGCCACAGCCAGGCGCAACAGGCACTCACCGACCTGCAGAACGGCATCACCGAGCTGCCGGCCGACCTCACGGAAAGGCTGCGCCCGAGTTTGGAAGAT TTGATCCGCTTCACCGCCGATGATCTGCTCGCCGCGGGTAAGCTGGCCGGTGATCCGCAGGGACTGCTGCTGCAGGCGGAGCGCGAAATGTCCGGAGCGC TGGCGCAACTCGACGACTACCGGGCTCAATCCGATCATCCTGGCGCGCAGCTTTATCAGCCGCCGCTATTCACGGCTGGGCAGCAACTGCTTCGACTCAG CCACGCACGGGGAAAACTGGTCGCATCCGGCCGGGACGAGCTCGCCAGCGACGTCGAGAAGACGTTGCACCAGCTCGAACAGGCCGCAGCGAAGCTGGAC GCCTTGCCCCTGCTCGGCATATTGGCCGCCGACCAGTCGGCCGCGAGCAGTTTCGCCGCGCTGCTCGACCTCGGCGATGCTGGGAAGCAAGCCAGCGAAG ACCGAGGCATCGCGCTCAAACGCGAGTTCGCCAGTCTGATCAAGCGCTACCCGGCCGAACTGCAGCGCACCCGTCAGCTGATAGGCCAACGCAGCGAACT GCTGGAAAGCAGCGTTCGTAAGATCGATGCAGTGCAGCAGGCGCTTGCCGAGCTGGAGCCAATCGTGCGTGCGGAGCATGGCCGTATCCAGGCCGAGGTG CGCCTGCTGCAGGGCGGCATCATCGCCCTGATTCTGCTCATTGCCCTGGCCATCGACCGCCTGCAGCGCCAACTCACCCGCACCCTCGGCCAACTCGTGC CGGCGCTATCGGCTTGGGCCGAGGGCGACTTCGCCAGCGATGCGCGGATCGAGTCGAAGATCCGCGAGATCGCCGATATCGAAAGCTCGCTCAATCGCCT GCGCAGCTACCTGCTGGACCTGGTCGGTACCCTGCGCCAGCAGGCGACCCAGGTTGCCGCCAGCAGCCGCAGCCTCGACGAAATGAGCAGCGATCTGCAC GAAGGCGCCCAGCGCCAAACGGGCGATACTGCGCAAATCCGCGATTCGCTAGGCGAACTGGAGGCCACCATCCAGCAGGTCGCCGATGGTGCAGGGGAAG CCGCCGAGGCTAGTCGCGCCGCAGCACGCGCGGTCCATCATGGCCAGCAGGTGATCGGCCAGAGCCTGACCGGCCTGCATGGGCTGGTCAGCGAGGTGCA GGACAATGCGGCGGCCATCGAACGTCTGGCCGACGAGACCACGACCATCGGCAACGTGCTGACGGTGATCCGCGCCATTGCCGAGCAGACCAACCTGCTC GCCCTGAACGCCGCCATCGAGGCGGCCCGCGCTGGCGGTCATGGACGCGGGTTCGCCGTGGTGGCCGACGAAGTACGCTCACTGGCCCAGCGCACCAGCG GTGCCACCGAGGAAATCCAGCAGCTGATCGGTCGCCTGCAGCAGGCCGCACGGCAGTCGGTGGAGGCTATGCGCAGCCAGGTCGAGCATGCGCAAAGCAC GGCTAACCTGGCGCAGAGTGCCGATCAGGCACTGGACGATATCGTCTCGACCATCGCCACCATCAGCCGCATGGCCGAACAGATCGCCCAGGCGACCGCC CAGCAGGGCGAAGCGGTAGGCGAGATTCGCGGACACAGTGAACGCATCCACCAGCTCGGCGACGCCAACCTGAGCCATATCAGCCGGGGACGCGAGCAAA GTGCGCAGATGCTGCAGCTGGGCAGCGAACTGGATCGGGCGACCCAGGCGTTCAGGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAAAGAAAACGGAGCCTGGCGCTCCGTTTCCTTATGCCGGCAAGCCTCCCTACCGCTAGCGGGGTGCGACCGGACGTTGCGGCTTGCCACCCTTGCCCGC CGGCTTGCCGCTCTTTTCCGCCTTGCGCCGGGCCTCGGCCGCGGCCTTGGCCTGCTCGCGCTTGTCCCAGGCGTTGCCGTCATGGCTGCGTGGCGGCAGG CCGCTGTGCTGGGTAAGGATCTTGCCGCCCTGCCCGGCCTTCTTGCTGCCGACCGGCGTCGAGTTCTTGCGCCGCGCGCTCTGATAGCCGTCCACCGCCG GCTGATGCGCCGGGATCAGCTGATGCTTGCCGTTGCCGATCAGATCGGCGCGCCCCATGCGAATCAGCGCCTCACGCAGCAACGGCCAGCCCTTGGGATC GTGATAGCGCAGGAAGGCCTTGTGCAGGCGCCGCTGCTCCTCGCTCTTGACCACGGTGACGCCTTCGCTCTTGTAGGTCACCTTGCGCAGCGGGTTCTTG
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Amino Acid Sequence |
>chemotaxis protein
MRLKSLTTLNTMLLIAVCLALGVTLWWSERAMERPYLLMARYLALSQQFQHHAAENIHGYLATGDALRHSQAQQALTDLQNGITELPADLTERLRPSLED LIRFTADDLLAAGKLAGDPQGLLLQAEREMSGALAQLDDYRAQSDHPGAQLYQPPLFTAGQQLLRLSHARGKLVASGRDELASDVEKTLHQLEQAAAKLD ALPLLGILAADQSAASSFAALLDLGDAGKQASEDRGIALKREFASLIKRYPAELQRTRQLIGQRSELLESSVRKIDAVQQALAELEPIVRAEHGRIQAEV RLLQGGIIALILLIALAIDRLQRQLTRTLGQLVPALSAWAEGDFASDARIESKIREIADIESSLNRLRSYLLDLVGTLRQQATQVAASSRSLDEMSSDLH EGAQRQTGDTAQIRDSLGELEATIQQVADGAGEAAEASRAAARAVHHGQQVIGQSLTGLHGLVSEVQDNAAAIERLADETTTIGNVLTVIRAIAEQTNLL ALNAAIEAARAGGHGRGFAVVADEVRSLAQRTSGATEEIQQLIGRLQQAARQSVEAMRSQVEHAQSTANLAQSADQALDDIVSTIATISRMAEQIAQATA QQGEAVGEIRGHSERIHQLGDANLSHISRGREQSAQMLQLGSELDRATQAFRF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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