Strain | Pseudomonas stutzeri strain 19SMN4, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CCCGACCATTTCCACCGAGCCGAGCATGCCCAGCTTGACCGCCGCAATAGGCATGTCGGCGATCACCGCATTGGCCTGGGCGAGCACCCATTCGCGGTCG AGCACGCGGAAGTCGGAGACGTTGACGGTGTCCTGCACGGTCAGTGCGGTGACGGTCGGCGCGGCGTGGCAAGCCTGCGCCAACAGAGCTTCGATGTCCG CCTGCAGACCGGCGCCGCCACTGGGATCATGGCCGGAAAGACAGAGGACGACAGGTCGTGAAGTAGGGTTTTTCATGGCGTGCGAGCTTATCACCAAACG ATGCTGGCGGGACGCAGCAGTTGTGCGTCGATCCGCCATCAACGCACTCTAGCCAGTCATCGGCTAATGGCGGTGTGTGCGATTCGCTTTTCCGGCGGGA ACGGGCGCTGTGGTAGATTGCTGGCACTTTGATTTTCGGACGCAGCGGCGGGGTTCACGGGCGTGAATTCGTGTTCGCCGCGCGGCCAGCACGAGGCATT
|
|
DNA Sequence for Gene |
>UIB01_RS02415
ATGCGGTACGTCTTCCTCTTCTTCCTGGCTCTTCTGCCTGCCCTGGCTGCTGCCGTCGAGCTTGATGAGCACACGCGCCATTTGCCGCTTGGCCAGGTGA TGCAGGTGTTCGAGGATCCGCTCGGCGAGGCGCGCATAGAAGACGTCGCCTCGACCGCTTTCGAAAGCCGCTTCCAGCCGCATCAGACCGCCGTGTTCAA CGCCGGTTATTCCCGCTCCGTGCACTGGGTGCGTGTCGATCTGCACTACCGGCCACAGGTGGCGCAGGGAGCCAGGCGCTGGTTGCTGGAGGTGGCCTAT CCGCCACTGGACAGCCTGCAGCTCTATCTGGCCGACGGCCAGGGCGGCTACCGCCTGGCCCGGGATACTGGCGACACCAAACCGTGGGCCAGTCGCGAGA TCCGCCAGGGCAACTACCTGTTCGAGATCGAACTGCAGCCCGAGCAGCCGCAGCGGGCCTATCTGCGCGTAGAGAGCGAGGGGTCGATCCAGGTGCCGCT GAGCCTCTGGTCGCAGCACGCCTACCTCGAAGCGCAGCCGGGGCGCATCTACGTGCTGGGCATGATCTACGGCGTGCTGCTGGCGATGCTGGTCTACAAC CTGTTCATCTATATCAGCATCCGCGACCCCAGTTATCTCTACTACATCCTCTACATCGCCGCGTTCGGTCTCTATCAGGTTTCGGTGAATGGCGCCGGCG TGCAGTTCCTCTGGCCGGACCGGCCCTGGTGGGCCAATGCCGCGACGCCGCTGCTGATCGGGGCTACCGGGCTGTTCGGCTGCCTGTTCACGCGCAGCTT CCTGCGCACCGCCGAGCACAGCCGCTGGGTGGACTGGCTGCTGCGGCTGATCATTGCCTTCTCCGTGGTCGTGATGGTGCTGGCGCTGGCGACCGATTAC GGAGTAGCCCTGCGTCTGGCCACCGCCCTGGCGCTGCTGTTCACGCTGGCAGTGTTTGCCGCCGGCATCCTGGCCTGGCTGCGCGGCATGCGCGTGGCGC GCTACTTCATCATCGCCTGGAGCGCGCTGCTGGTCGGCGGGCAGATCAACACGCTGATGGTGCTCGGGCACCTGCCGCACAATTTCCTGACCATGTACGC CAGTCAGCTGGGCGCCGCGCTGGAGGTGGTGCTGCTGTCGATGGCGCTGGCCGATCGCATCAATGCCCTCAAGGACGAGCGGGCGAAGATCCTGGAAAAC GCCCGTGCCGAGCTGGAGCAGCTGAACCGCGAACTCGCCGAGAGCAACCGGCTCAAGGACGAGTTCCTCTCCAACATCAGTCATGAATTGCGCACGCCGA TGATGGGCGTGATGGGTGCCCTGGAGCTGTTGCCCAAGTCCGATACAGTGGAAGAGCTGCAGCAGTATCAGCACATCGCCACCGGATCGGCGCGCGACAT GATGCGCCTGGTCAACAACATCCTGGTCCTCAGCGAACTGCGTGCCGGCAAGCTGCGTCTGCAGGAGCAGCGCTTCAGCCTCAGGGATACAGCGGCACGG CTGCACCAGCAGTTCGGTGGCCTGGCCCGGGACAAGGGATTGGCCTTCGATCTCGAGTTCGACGAGAAGCTGCCCGATCGCGTTTACGGCGATGGCGAAA AGCTGGAACAGAGCATCTGTCATCTGCTCGACAACGCGGTCAAGTTCACCTCCCGTGGCGCCGTGAACCTGCGCTTCACGGGCGCGATCGAGCGGCGCCA GCTGCAGCTGAACGTCGAGGTCGTCGACAGCGGCATCGGTTTCAGCGATGCCGACCAGGCCTTCCTCTATCATCAATTCCGCCAGGTGGATGGCTCGATG ACGCGCCGCTACGGCGGTCTCGGCATCGGCCTGGCGATCAGTCGCGGTCTGATCCAGGTGCTCGGCGGTTGGCTGGAACAGCAGTCGCGGCCGGGGCTGG GCAGCCGCTTCGGCATTCATGTCCGCTTTGCCCTGAGTTCTGCCGACGGGCCGGCTGCCGACGCAGCGTCTGCCGTTCCGCCCTCCGCGCCGATTGCCTG A
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CGCGCGGACCTTTTGGCCGATACCTCGCTTCAATCGTCGCCGCAGCGCGTGTTTCACTGCTGGTCCACCGTGCTTGCCGACTACGCTTGCTGACAGCCGT CGCGGCATCGGTATCGAAGGAGGACGTTCAGATGAATCTGCAGACCAGCGCCGAAACCCATGAGGTCACCAATCAGGTGCCGCCGCTCGATGGTGCCAAC CTCTACCGCATCGATCTGCCGCTGCAGCAGTGGGTACAGCGTTACCATGCCGGCTGGGCCGAGGATCGTCTGGACTGCTACGGCGCGCTCGCCGGTGGGC CGCTGATGCAGGCCGGCTTTCTCGCCAACGAGAACAAACCGGTGTTCAAGAGCCATGACCGCTACGGCCATCGTATCGATCTGGTGGAGTTTCACCCGGC CTATCACGAGCTGATGCGCACGGCCATCGAGCACGGTATACCGTCGCTGCCCTGGAGCGATCCCCAGCCCGGCGCTCAGGTGGCGCGTGCCGCCTTGATG
|
|
Amino Acid Sequence |
>histidine kinase
MRYVFLFFLALLPALAAAVELDEHTRHLPLGQVMQVFEDPLGEARIEDVASTAFESRFQPHQTAVFNAGYSRSVHWVRVDLHYRPQVAQGARRWLLEVAY PPLDSLQLYLADGQGGYRLARDTGDTKPWASREIRQGNYLFEIELQPEQPQRAYLRVESEGSIQVPLSLWSQHAYLEAQPGRIYVLGMIYGVLLAMLVYN LFIYISIRDPSYLYYILYIAAFGLYQVSVNGAGVQFLWPDRPWWANAATPLLIGATGLFGCLFTRSFLRTAEHSRWVDWLLRLIIAFSVVVMVLALATDY GVALRLATALALLFTLAVFAAGILAWLRGMRVARYFIIAWSALLVGGQINTLMVLGHLPHNFLTMYASQLGAALEVVLLSMALADRINALKDERAKILEN ARAELEQLNRELAESNRLKDEFLSNISHELRTPMMGVMGALELLPKSDTVEELQQYQHIATGSARDMMRLVNNILVLSELRAGKLRLQEQRFSLRDTAAR LHQQFGGLARDKGLAFDLEFDEKLPDRVYGDGEKLEQSICHLLDNAVKFTSRGAVNLRFTGAIERRQLQLNVEVVDSGIGFSDADQAFLYHQFRQVDGSM TRRYGGLGIGLAISRGLIQVLGGWLEQQSRPGLGSRFGIHVRFALSSADGPAADAASAVPPSAPIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|