Strain | Pseudomonas stutzeri strain 19SMN4, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
ACCGGCAGGTGCTGTTCAGTTTCGACGCCGAGCGCCTGGCGCGCATGAGCGATGCCGAGATCGACGAGCGCATGCAGGACCCTGGCATCATCCGCAACCG GCGCAAGCTCGAGGCCGCGCGCAGCAATGCTCATGCCTGGCTGAAGCTGGAAGATCCGGTGGATTTCATCTGGTCCTTTGTCGGCGGCGACCCGAAGATC AACCGCTTCGAGCGCATCGATCAGGTCCCTGCCGTCTCGCCCGAGGCGGAGGCCATGAGCAAGGGCCTGAAGAAAGCCGGCTTCAGCTTTGTCGGGCCGA CCATCTGTTACGCCTACATGCAGGCCTGCGGCCTGGTCATGGATCACCTCACCGACTGCGAGCGGTATGCCGTGCTGGCTGGCACCGAATGATCCACCGC AGGGCTGCGTTGCCAAGATGCAGGGCATTGCGACGGCTGCGCCTGAAAGCTGATCACGGTTGCAGGTAGACTAGGCAACCTGAAAATTTCGGAGTGCGGT
|
|
DNA Sequence for Gene |
>UIB01_RS00060
GTGGAAAAGCTCAAAGGTGCCATCGTCGTCGGCTCCCTGCGACTCTTCGCTCGACTGCCCTGGCGCATGGTCCAGGGGCTGGGCGCGATGATTGGCTGGC TGATGTGGAAGCTGCCGAACCGCTCGCGCGAAGTGGCACGGATCAATCTGCAGAAGTGCTTCCCCGAGCTGAGCCCGGCGGAACTCGATGCCCTGCTCGG GCGTACCCTGCGTGAAACCGGTATGACCTTCACCGAAAGCGCCTGTGCCTGGATCTGGCCGGCGGAGAAGACCTTGAGACTGGTCCGCGAGGTGGAAGGC CTCGACGTGCTGCAGGCGGCGCTGGCCTCGGGCAAGGGCGTGGTCGGCATCACCAGCCACCTGGGCAACTGGGAAGTGCTCAATCACTTCTACTGCGCGC AATGCAAACCGATCATCTTCTACCGGCCACCGAAGCTGAAGGCGGTGGACGAGTTGCTGCAACAGCAGCGCGTGCAGCTGGGCAATCGCGTCGCGCCGTC GACTCGTGAAGGGATTCTCAGCGTCATCAAGGAAGTTCGTCGCGGCGGTGCTGTGGGCATCCCGGCCGACCCTGAGCCCAGTGAAGGCAGCGGCATATTC GTGCCATTTCTCGCCACCCAGGCGCTAACCAGCAAGTTCGTGCCCGGCATGCTGGCCGGTGGCAAGGCGGTTGGCGTGTTTCTTCACGCGTTGCGCCTGG AGGATGGCTCAGGCTACAAAGTGGTACTCGAGGCCGCGCCCCAAGGCATGTACAGCGAGGATGCCGAAACCGGTGTGGCGGCCATGAGCGCGATGATCGA GAAGTATGTCCGCGCCTATCCCAGCCAATACATGTGGACCATGAAGCGCTTCAAGAAACGCCCCGCCGGCGAGAAGCGCTGGTACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CCAAACTCGAACAAGAACGACAAGGACGAACTCAATGCGCAACCAGCGTCAGCATCCGCGTACCAACATGAAGTGTCGCATCCGCATCGCGCATCCGGCC TTCGGTGAGGTCTTCGCCCATACCCGGGATCTGTCCGATGGCGGTGTCTATGTGCGGCATCCGGAACTGGTGGTTTTACACCCCGGGGACGAAGTGACTG GTCAGGTCCAGGATCTGCCCATTCCGGCGCCGGAACTGCGAATGGTGGTCATGCGGGTCGATGCCGAAGGGGTCGGCCTGCAGTTCCTGCGCGAGGACTG ATCCTTTCGGCGCGCGGCGGCCTGGTGGTTCAGTCGGGCGTCAGCCGGTCGAGCCGGCGCAGGAACACGCTCATTTCCTTTTCCGCCTGCTTGTCACCCT GAGCGCTAGCTGCCGCGATGCCGCGCTCCCAGGCCTGATGGGCGCCTTGCTTGTCGCCATCGGCCTGCAACGCCTTGCCCAGCAGCTTCCACGCGGCGGA
|
|
Amino Acid Sequence |
>lipid A biosynthesis lauroyl acyltransferase
MEKLKGAIVVGSLRLFARLPWRMVQGLGAMIGWLMWKLPNRSREVARINLQKCFPELSPAELDALLGRTLRETGMTFTESACAWIWPAEKTLRLVREVEG LDVLQAALASGKGVVGITSHLGNWEVLNHFYCAQCKPIIFYRPPKLKAVDELLQQQRVQLGNRVAPSTREGILSVIKEVRRGGAVGIPADPEPSEGSGIF VPFLATQALTSKFVPGMLAGGKAVGVFLHALRLEDGSGYKVVLEAAPQGMYSEDAETGVAAMSAMIEKYVRAYPSQYMWTMKRFKKRPAGEKRWY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|