Strain | Pseudomonas stutzeri strain 19SMN4, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TACTTCCAGCAGGTTGGTGGCGTCGAGTGCTATCCGGTCACCGGCGAGATCACCTACGGTCTCGAGCGCCTGGCCATGTACCTGCAGGGCGTCGACTCGG TCTATGACCTGATCTGGGCCGACGGTCCGTTCGGCACCGTGACCTATGGCGACGTGTTCCATCAGAACGAAGTGGAGCAGTCGACCTATAACTTCGAGCA CGCCAACGTGCCGAAGCTGTTCGAACTCTTCGACTTCTACGAAAGCGAAGCCAACCGCCTGATGGCCGCCGAACTGCCGCTGCCGGCCTACGAAATGGTG GTCAAGGCCTCGCACACCTTCAACCTGCTTGATGCCCGCCGCGCCATTTCGGTCACCGCTCGCCAGCAATACATCCTGCGCGTACGCAGCCTGGCGCGCT CGATCGCCCAGAGTTACCTGCTGGCCCGCGCCAAACTCGGCTTCCCCATGGCCACCCCCGAATTGCGTGACGAAGTGCTGGCGAAGCTGGAGGCTGCAGA
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DNA Sequence for Gene |
>UIB01_RS00045
ATGAGTGCACTGGATTTCCTCGTCGAACTGGGTACCGAAGAACTGCCCCCGAAGGCGCTCGCCAAGCTGGCCGAAGCCTTCTGCGCCGGTATCGAGAAGG GCCTGAAGGACGCCGGCCTGGGCTTCGTCAAGGCGCAGGCCTATGCCGCACCCCGGCGCCTGGCGGTGCTGGTCGAGCAGCTGGCCACGCAGCAGCCTGA TCGCAGCATCAACCTCGACGGCCCACCGATGCAGGCCGCCTTCGACGCCGACGGCGAGCCGACCCAGGCCGCCCTGGGCTTTGCCCGCAAGTGCGGCGTC GACCTCGCCGAGATCGATCGCAGCGGCGCGAAACTCAAATTCAGCCGTACCATTGAAGGCCAGCCCGCCAGCCAGCTGCTGCCAGGTATCGTCGAAGCTT CGCTGAACGATCTGCCGATCCCCAAGCGCATGCGCTGGGCCGCACGCAAGGAAGAATTCGTTCGCCCGACCCAGTGGTTGGTGATGCTCTTCGGTGAGCA GGTGATCGATTGCGAGATCCTCGCCCAGCGTGCCGGTCGCGAATCCCGCGGCCACCGCTTCCACAGCCCGGGCCAGGTGCACATTTCCAAGCCTTCCAGC TATCTGGAAGACCTGCGTGGCGCCCATGTGATCGCCGACTTCGCCGAGCGCCGCGAGCTGATCGCCAAGCGCGTCGAGCAGCTGGCTGCCGAGCAGAACG GTACGGCCATCGTGCCGCCGGCGCTGCTCGATGAAGTGACCGCGCTGGTCGAGTGGCCGGTGCCGCTGGTCTGCTCGTTCGAGGAACGCTTCCTCGAAGT GCCGCAGGAAGCACTGATCACCACCATGCAGGACAACCAGAAGTACTTCTGCCTGCTGGATGCCAACGGCAAGCTGCTGCCGCGTTTCATCACCGTGGCC AACATCGAATCCAAGGACCCGGCGCAGATCGTTTCCGGTAACGAGAAGGTCGTGCGCCCGCGTCTGACCGACGCCGAGTTCTTCTTCAAGCAGGACAAGA AGCAGAAGCTCGACAGCTTCAACGAGCGCCTGAAGAACGTGGTGTTCCAGGCCCAGCTCGGCACCGTGTTCGACAAGGCCGAACGCGTCTCGCGCCTGGC TGGTCTGATCGCCGAACGCACCGGTGGCGACAAGCAACGTGCCGCCCGCGCCGGTCTGCTCTCCAAGTGCGACCTGGCCACCGAAATGGTTGGCGAGTTC CCGGAAATGCAGGGCGTTGCCGGTTACTACTACGCGCTCAATGACGGCGAGCCGGAAGACGTGGCGCTGGCGCTGAACGAGCAGTACATGCCGCGCGGCG CCGGTGGCGAATTGCCGACTACTCTGACCGGCGCCGCCGTGGCGGTCGCGGACAAGCTCGACACCCTGGTCGGCATCTTCGGCATCGGCATGTTGCCCAC CGGCTCCAAGGACCCCTACGCCCTGCGCCGTGCCGCCCTTGGCGTGCTGCGCATCCTCATCGAGAAGCAGCTGGACCTGAATCTGGTCGAGGCAGTGAAC TTCGCCATCGGCCAGTTCGGTACGCAGGTCAAGTCGGCCGGCCTCGCCGATCAGGTCCTGGAGTTCATCTTCGATCGCCTGCGTGCGCGCTACGAGGACG AAGGCGTCGACGTCGCCGCCTACCTATCGGTGCGTGCCGTGCAGCCGGGCTCGGCGCTGGACTTCGATCAGCGCGTGCAGGCCGTACAGGCTTTCCGCAC GTTGCCGGAGGCTGCAGCACTGGCCGCAGCCAACAAGCGCGTCTCCAACCTGCTGAGCAAGTTCGATGCGAAGCTGCCGGAAGCGGTCGAGCCGCGCTGG TTCGACAACGCCACCGAGTTCTCGCTGTACTCGGCGATCCAGCAGGCCGAGCAGGCGGTGCAACCGCTCGCCGCGGCGCGTCAGTACCGTGAGGCGCTGG AGCGTCTGGCGCACCTGCGTGGCCCGGTGGATGCCTTCTTCGAGGCGGTGCTGGTGAATGCCGAAGATGCTTCGGTGCGCGCCAACCGTTATGCCTTGCT GGCCCGGCTGAGAGGACTGTTCCTTGGCGTTGCCGATATTTCCGCACTTGGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCCGTGAAGCTGATCGTGCTGGACCGTGATGGCGTGATCAACGAGGACTCCGACGAGTACGTGAAGTCGCTGGAGGAGTGGATCCCCATTCCCGGCTCG CTGGAAGCCATCGCGCGGCTATGCAGGGCTGGCTGGACGGTGGCTGTGGCCACCAACCAGTCGGGCGTCGCGCGCGGCAAGTTCGACCTCAGCACCCTCG GTGACATGCATTTCAAGATGCAGCAGCTGGTGATGGAGCAGGGCGGACGTATCGATCTGATCGTGCACTGCCCGCACGGTCCGGACGATGGCTGCAACTG CCGCAAGCCGAAGCCTGGAATGTTTCGCAGCATTGCCGAGCACTTCGGCCTGGCGGACCTGAAGGGCGTGCCGGTGGTTGGCGACAGCCACCGCGATCTG CATGCCGGCATGCTGCTCGGCGGCGTGCCCTACCTGGTCAGAACCGGGAAGGGCCTGCGCACCCTGGAAGGTACGTTGCCGCCAGGTACCCAGGTCTTCG
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Amino Acid Sequence |
>glycine-tRNA synthetase subunit beta
MSALDFLVELGTEELPPKALAKLAEAFCAGIEKGLKDAGLGFVKAQAYAAPRRLAVLVEQLATQQPDRSINLDGPPMQAAFDADGEPTQAALGFARKCGV DLAEIDRSGAKLKFSRTIEGQPASQLLPGIVEASLNDLPIPKRMRWAARKEEFVRPTQWLVMLFGEQVIDCEILAQRAGRESRGHRFHSPGQVHISKPSS YLEDLRGAHVIADFAERRELIAKRVEQLAAEQNGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDANGKLLPRFITVA NIESKDPAQIVSGNEKVVRPRLTDAEFFFKQDKKQKLDSFNERLKNVVFQAQLGTVFDKAERVSRLAGLIAERTGGDKQRAARAGLLSKCDLATEMVGEF PEMQGVAGYYYALNDGEPEDVALALNEQYMPRGAGGELPTTLTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLNLVEAVN FAIGQFGTQVKSAGLADQVLEFIFDRLRARYEDEGVDVAAYLSVRAVQPGSALDFDQRVQAVQAFRTLPEAAALAAANKRVSNLLSKFDAKLPEAVEPRW FDNATEFSLYSAIQQAEQAVQPLAAARQYREALERLAHLRGPVDAFFEAVLVNAEDASVRANRYALLARLRGLFLGVADISALG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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