Pseudomonas stutzeri 28a24, CH92_RS20615
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain 28a24, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTCGAGGAGGTGAACCGCTTGATCAACCGGCCCATCGATTACGAACCCACCTCTCGAGAACCCGCATTCTCAGGCCCTCGCATTCGCGAAAGGCGAAGCC GGGCTTGTTCAATGGTGAATTTCCAGCGGTCCGGGGCCCCAAGTAGAGTCATCCGAGATGAGGGATCACTCGATTGATGAAAGATGCCGACCGCCAGCAC GGCAATCTGCCATCTACGGCCTATGGCCATGCACGCTGACAAGACGGCAAACCTGCGGGCCAGACGGGGCGGCTGAGAATTATTCGTCAGTATTTTGCCA TCATGCGAGTAAACTCCCGTGTTACGAGTCGCATCGTCCTATGCATTTGGCACAGGGCTTGCTCTCGCTAACACGATGAACCGGCAAGCCGAGCCGATTA GGGGCGCATGTTGCCAATGACGCCTAGACTTGTCTTGCTGGTTACAGCCGAGCTTTTCGCTTTATGCGGTAGCTCAATTCACAACAAGAGGAAAACAACA
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| DNA Sequence for Gene |
>CH92_RS20615
ATGTTCAAACTGACCGCCACGGCGCTTGCCTGCGCCCTATCCCTGGGAATTGCAGGCCTGGCCCAGGCTGCCGACCCGATTCTGATCAAATTCTCCCACG TGGTTGCCGACAACACGCCGAAGGGCCAAGGCGCCAACCTGTTCAAGAAGTTGGTAGAAGAACGGTTGCCCGGCAAGGTCGAAGTTCAGGTTTACCCGAA CTCGTCGCTGTTTGGCGACGGCAAGGAAATGGAAGCGCTGCTGCTGGGCGACGTTCAACTGATCGCTCCGTCGCTGGCCAAGTTCGAACATTATTCCAAG GGCGTTCAGGTGTTCGACCTGCCGTTCCTGTTCGACAACATCCAGGCGGTCGACCGCTTCCAGCAGAGCGAAGCCGGCCAGAAGCTGCTGAGCTCCATGG AAGACAAGAACATCACCGGCCTGGGCTACTGGCACAACGGCATGAAGCAGCTGTCGGCCAACAAGGAACTGCGCGAGCCCAAAGACGCCCGTGGTCTGAA GTTCCGTGTGCAGGCTTCTGCCGTACTCGACGAGCAGTTCAAAGCCCTGCGCGCCAACCCGCGCAAGATGAGCTTCGCCGAGGTTTATCAGGGTCTGCAG ACCGGTGTGGTAAACGGTGCCGAGAACCCCTACTCGAACATCTACTCGCAGAAGATGCACGAAGTGCAGAAGCACATCACCGAGTCCGACCATGGTCTGC TCGATTACATGCTGATCACCAACACCAAGTTCTGGAACGGTCTGCCGGATGACGTCCGTGGCGAACTGGAAACCATCCTGGACGAAGTCACGGTCGAGGT GAACAAGCAGGCCGACGCGCTGAACCAGAAAGCCAAGGCAGATATCCTGGCCGCCGGCACCACTGAAATCCTCGTACTGACGCCGGAAGAGCGTGCCAAG TGGCGTGAAGCCATGAAGCCGGTCTGGAAGAAGTTCGAGAATGACATCGGTGCCGACCTGATCAAGGCAGCCGAAGCGTCCAACCAGGCTAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCCTGGGCAGAGGGAGCGAGGCCTCTCGCTCCCTCCGTTCCGGCAACAGCAATACCGACAGCGCAATGAAGAATATCCAGACGAGCATGACGGCAAGCT GACCCACGGCTTCCATCCGCTCTAAAACAAGCATCTTCATTGCTCTGTCATCCGGTAACCAGACCGGAACAACGGCGCACGATCCGTACGCCCGTCGAAA CAATGCATTCCATCGGGAGATGTCATCCATGAACGCCCTCTGGCGCGTCTGGGACCACTTCGAGGAAGGCTTCATTGCCTTTCTGCTGGCCGCCATGACT CTGGTGACCTTCGTTTATGTGGTCCTGAATAACCTCTACACCGTCTTCTATAGCCTTGGCGATCGATTCGAGGGGGCCAGCGATTTCTTTTTCGCCATTG GCGACTTCGTCATCGGCATGGCCCAGGCGATGACCTGGAGCACCGCGCTGACCAAGGCGCTGTTCGCCTGGCTGATCTTCTCCGGTCTGGCATACGGCGT
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| Amino Acid Sequence |
>C4-dicarboxylate ABC transporter
MFKLTATALACALSLGIAGLAQAADPILIKFSHVVADNTPKGQGANLFKKLVEERLPGKVEVQVYPNSSLFGDGKEMEALLLGDVQLIAPSLAKFEHYSK GVQVFDLPFLFDNIQAVDRFQQSEAGQKLLSSMEDKNITGLGYWHNGMKQLSANKELREPKDARGLKFRVQASAVLDEQFKALRANPRKMSFAEVYQGLQ TGVVNGAENPYSNIYSQKMHEVQKHITESDHGLLDYMLITNTKFWNGLPDDVRGELETILDEVTVEVNKQADALNQKAKADILAAGTTEILVLTPEERAK WREAMKPVWKKFENDIGADLIKAAEASNQAK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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