Pseudomonas stutzeri 28a24, CH92_RS19250

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri strain 28a24, complete genome. [Details]
DNA Sequence Upstream of Gene
GCGACAACGCTGCCAAAGCCCGACTGATATTGCCGGGCGGCTCCGAGTACGGTCATGAGGGTACGCTCGAAGTGTCTGAGGTAGCCGTGGACGAAGGCAC CGGCTCGGTCACCCTGCGCGCCGTGTTCCCGAACCCGGACAAGAACCTGCTGCCGGGTATGTTCGTCCACGCGCGGCTGTTGGCCGGCGTTCGCCAGGAG GCCTTGCTGGTGCCGCAACAGGGCGTCACCCGCAATGCTCGCGGCGAGCCGACAGCGATGGTGGTTGGTCCGGATAACAAGGTCGAACTGCGCCAGATCA AGACGGAGCGCGCAGTGGGCAACCGCTGGCTGGTCAGCGACGGCTTGCAACCCGGCGACCGGGTCATCACCGAAGGGCTGCAGTTCATTCGCCCGGGCGC CGAGGTCGATCCACGCCCGGCCGGTAATGTCCAGCAGGGCGGGCCGGCCAGTGATCAGGCTGGCGCAGCGCCGGCCGCTGGCCAAGGGGAATAACCGAAC
DNA Sequence for Gene
>CH92_RS19250
ATGTCCAAATTCTTTATCGATCGGCCGATCTTCGCCTGGGTTATCGCCCTGGTGCTGATGCTCGCCGGTACGCTGGCGATTCTCAATCTGCCGGTCAATC AGTATCCCAGTATCGCACCGCCCAACGTGGCGATCTCGGTCAACTACCCGGGCGCTTCGGCGCAAACGGTTCAAGATACCGTCGTCCAGGTCATCGAGCA GCAGCTCAACGGCCTAGATGGGCTGCGCTACATCTTCTCGGAGAGCAACTCCGACGGTAGCATGACCATCAACGTAACGTTCGAGCAGGGCACCAATCCC GATATCGCCCAGGTACAGGTGCAGAACAAGCTGCAGCTGGCTACCCCTTTGCTGCCGCAGCAGGTCCAGCAGCAGGGCATCCGCGTATCCAAATCGGCGC GCAACTTCCTGATGGTGGTCGCGCTGGTGTCCAAGGACGGCCAGCAGAGCAACTACGATCTGGCCAACTACATCGTGGCCAACATCCAGGATCCGATTTC CCGTACACAGGGTGTTGGTGACTTTCAAGTGTTCGGCGCTCAATACGCCATGCGCATCTGGCTTGATCCTGCCAAGTTGCAGCAATATCAGCTGACCGCT GTTGATGTCCGCTCGGCGATACAGGAGCAGAACGTCCAGGTATCGTCCGGCCAACTCGGTGGTCTGCCCGCGCTGGAAACCCAGCAGCTCAACGCCACCA TCATCGGCAAGACGCGTCTGGAAACACCTGAGCAGTTCCGCAAGATCCTGTTGAAGGTCAACGCAGACGGCTCTCAGGTGCGCCTACGCGACGTCGCCAA AGTCGAGCTCGGCGCGGAGAGCTATGCGATTCGCGCCGAATACAACGGTCAGCCTGCCGCAGGCCTGGGCATTCGCCTGGCCGCCGGTGGCAACGCGCTG GACACCGCCAACGCGGTGCGCGAGACCATATCCGAGCTGGAACCCTTCTTTCCGCCGGGCGTCGAGGTGGTTTACCCGTACGACACCACGCCAGTGATCT CGGCCTCGATCGAAGGTGTGGTGCACACGCTGGTCGAAGCCTTCGTGCTGGTCTTTCTGGTGATGTTCCTGTTCCTGCAGAATCTGCGGGCTACGCTGAT TCCGACATTGGCCGTACCGGTGGTGATCCTCGGCACTTTCGCGATCCTGCTGACGTTCGGCTACAGCATTAACACACTCACCATGTTCGCCATGATTCTG GCTATCGGTCTGCTGGTGGACGATGCCATCGTGGTGGTGGAGAACGTCGAGCGGGTGATGCGCGAGGAGGGGCTCTCCGCCAAAGAGGCGACGCGCAAGT CCATGGGGCAGATCCAGGGCGCGCTCGTGGGGATCGGCGTGGTGCTTTCAGCCGTGTTACTGCCGATGGCCTTCTTCGGTGGCTCCACCGGGGTGATCTA CCGCCAGTTCTCCATCACCATCGTCTCGGCCATGGTGCTGTCGGTGCTGGTCGCGCTGATTTTCACGCCGGCGTTGTGCGCCACTATCCTCAAGCCGCAC GACGGTGACCACGAAGGCAAGCGCGGCTTCTTCGGCTGGTTCAACCGCACCTTCGACCGTGGCACCCGTCGCTACGAAAGCGGCGTGGCTGCTTTGTTGC GGCGCAAGGCGCCTTACTTGTTGATGTATCTGCTCATCGTTGGCGTGATGGTCTGGATGTTTACCCGCATTCCCACCGCGTTCCTGCCTGAGGAAGACCA GGGCGTGCTATTCGCCCAGGTGCAGACGCCAGCCGGCTCGTCCGCCAGCCGCACCCAGGAGGTGGTTGAGCAGATGCGCGACTACCTGTTGAAAGAGGAA AGCGAGACGGTACGTTCGGTGTTCACCATTACCGGCTTCAACTTCGCCGGTCGCGGCCAGAGCTCTGGCATGGCCTTCATCATGCTCAAGCCATGGGAGG AGCGCACCGAATCCGGGCAGGGTGTGTTCGACCTGGCCCAACGAGCCCAGGGGTATTTCTTCAGCCTGCGCGACGCCATGGTGTTCGCCTTCGCACCGCC AGCGGTGATGGAGCTGGGCAATGCGACCGGTTTCGACGTTTATCTGCAGGATCAGGCCGGGCTCGGTCACGAGGCCCTGACCCAAGCGCGTGATAAGTTC ATGGAGCTGGCGGGTCAGGATCCGACGCTAACCGGGGTTCGCTTCAATGGCCTGCGGGACGAGCCGCAGTACCACCTGATCATCGACGATGAAAAGGCGC GTGCTCATGGTGTATCGCTCGCAACGATCAACGACTCGCTGTCCATCGCTTGGGGTTCGAGCTACGTCAACGACTTCATCGACCGCGGGCGCGTCAAGCG CGTTTACATGCAGGGCGAGCCCTCCTCGCGGATGAATCCTGAGGACCTTGGCAAGTGGTATGTGCGCAACGATGCCGGCGAGATGGTGCCGTTCACTGCC TTTGCCACCGGCGAATGGACCTACGGGCCACCCAAGCTGACGCGCTTCAATGGCGTGCCGGCGATGGAGATTCTCGGCTCTGCCGCCCCGGGCTACAGCT CCGGCGAGGCGATGGCCGCAGTCGAACGGATCGCCGAGCAATTGCCCACCGGCATTGGCTACTCCTGGACAGGCCAGTCCTATGAGGAGCGCCTGTCCGG ATCGCAGGCGCCGGCCCTGTATGCTCTGTCGCTGCTGGTGGTGTTCCTCGCGCTCGCGGCGCTATACGAGAGCTGGGCGATTCCGTTCTCGGTCATGCTG GTCGTGCCGCTGGGTATCGTCGGCGCACTGGCGTTCACCATGGGGCGTGGGCTGTCTAATGACGTCTTCTTCCAGGTGGGGCTGCTGACTACCATTGGTT TGTCGGCGCGTAACGCGATCCTGATCGTCGAATTCGCCAAAACGCTGCATGAGCAGGGCATGACATTGGTCGACGCGGCAATCGAAGCCTGCCGCATACG TCTGCGGCCTATCGTGATGACCTCGCTCGCGTTCATGCTCGGTGTGCTTCCGCTGGCGATTTCCAGCGGCGCGGGCGCGGGTAGTAAGCATGCAATTGGT ACTGGCGTGATCGGCGGCATGCTCAGCGCCATGTTGTTGGCCATATTCTGGGTACCGCTGTTCTATGTTGTGGTGTCTTCGCTGAGTGGGCGCAGAAAAA AGGTCGCTGATGAACCGAGGGGAGATTCGCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACAAGTCGGTAATGACCCTGGCACTGATGACCGCGTTGAGCGGCTGCTCCCTGATTCCCGAGTACCAGCGTCCTGATGCTCCCACGGCGGCCAACTGGCC GGAGGGCGAAGCCTATGAGGGCGTTGTCAGCGCGGCTCAGGGGCAACAGAAGCTGGACTGGGAAGCATTCTTCCGCGACCCGGCACTGCGCCAACTGATT GGTGTGGCGTTGGAAAATAACCGCGACCTGCGTGTCGCGGCGCTTAACGTCGATGCCTATCGTGCGCTGTATCGCATCCAGCGAGCCGACCTGCTGCCAA TCGTGAGCGCTGACGGTACTGGCAGTCGCACACGGACGCCAGGCGACCTCAATCAGACCGGACAGAGCACGATAAGCAGTCAATACAGTGCAACGCTCGG GGTGTCTTGGGAACTGGACTTGTTTGGTCGTCTCGGCAGTCTGCGTGAGCAAGCGTTGCAGGAATACTTCGCCACCGAAGCGGCGCAGCGCAGCACGCAG
Amino Acid Sequence
>multidrug efflux RND transporter permease subunit
MSKFFIDRPIFAWVIALVLMLAGTLAILNLPVNQYPSIAPPNVAISVNYPGASAQTVQDTVVQVIEQQLNGLDGLRYIFSESNSDGSMTINVTFEQGTNP DIAQVQVQNKLQLATPLLPQQVQQQGIRVSKSARNFLMVVALVSKDGQQSNYDLANYIVANIQDPISRTQGVGDFQVFGAQYAMRIWLDPAKLQQYQLTA VDVRSAIQEQNVQVSSGQLGGLPALETQQLNATIIGKTRLETPEQFRKILLKVNADGSQVRLRDVAKVELGAESYAIRAEYNGQPAAGLGIRLAAGGNAL DTANAVRETISELEPFFPPGVEVVYPYDTTPVISASIEGVVHTLVEAFVLVFLVMFLFLQNLRATLIPTLAVPVVILGTFAILLTFGYSINTLTMFAMIL AIGLLVDDAIVVVENVERVMREEGLSAKEATRKSMGQIQGALVGIGVVLSAVLLPMAFFGGSTGVIYRQFSITIVSAMVLSVLVALIFTPALCATILKPH DGDHEGKRGFFGWFNRTFDRGTRRYESGVAALLRRKAPYLLMYLLIVGVMVWMFTRIPTAFLPEEDQGVLFAQVQTPAGSSASRTQEVVEQMRDYLLKEE SETVRSVFTITGFNFAGRGQSSGMAFIMLKPWEERTESGQGVFDLAQRAQGYFFSLRDAMVFAFAPPAVMELGNATGFDVYLQDQAGLGHEALTQARDKF MELAGQDPTLTGVRFNGLRDEPQYHLIIDDEKARAHGVSLATINDSLSIAWGSSYVNDFIDRGRVKRVYMQGEPSSRMNPEDLGKWYVRNDAGEMVPFTA FATGEWTYGPPKLTRFNGVPAMEILGSAAPGYSSGEAMAAVERIAEQLPTGIGYSWTGQSYEERLSGSQAPALYALSLLVVFLALAALYESWAIPFSVML VVPLGIVGALAFTMGRGLSNDVFFQVGLLTTIGLSARNAILIVEFAKTLHEQGMTLVDAAIEACRIRLRPIVMTSLAFMLGVLPLAISSGAGAGSKHAIG TGVIGGMLSAMLLAIFWVPLFYVVVSSLSGRRKKVADEPRGDSQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site