Strain | Pseudomonas stutzeri strain 28a24, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TCGCCCAACCAACTCTTCGTGGATTCGCTGTATCGCGATCATCGCGACTGGCTGCTCAGTTGGCTGCGGCGCTATCAGGCCTGTCCGCACCGCGCCGAGG ACTTGAGCCAGGACACCTTTCTGCGCTTGCTCAAACGCAATGATCTGCTCGGCGTGCGCGAACCGCGCGCGTTACTGGCGACCATCGCGCGCGGCCTGCT GATCGATCATTTCCGTCGCAGCGCACTGGAACGTGCGTATCTCGATGAGCTGGCGCTTCAGCCGGAAGACACACAGCCCAGCGCCGAAGAGCAACTTCAA GTCATCGAAGCCCTGCGTCAGGTGAACACCCTGCTTGGCCAGCTCTCGGCGAATGCGCGTGCGGCCTTCTTCTACAACCGCCTGGACGGTATGACGCACG GCGAGATCGCTCAGCGTCTCGGCGTTTCGGTCCCTCGCGTGCGGCAATATCTGGCTCAGGCGCTGCGCCAGTGCTACATCGCGGTTTACGGCGAGCCCAC
|
|
DNA Sequence for Gene |
>CH92_RS19050
ATGAACATCGACCGCCAACCGGTATCGAGCCGTGTCCTCGATGAAGCCATCGCCTGGCAACTGCGCCTCGGTGACGAAACGGCTGGCCCCCACGTCAACG CCGAACTCCAGCGCTGGCTGAGCGATAACGCCGAGCATGCCAAAGCCTGGGCACAACTGGGCGGCATCGACCAGCAACTGGGCAGCATCAATTCGCCCAG CGCGCGGCATGCGCTGCAAGTCAGCGCGACGTCCAAGCGACGGCGCACCACCGGTCGCGCCTTTCTCGGTCTGGTCTTGCTCGGCACGGTGGGGGTAGGA CTGACACTCCAGTCACAGCCTTTGCCGGTGTGGCTGGCCGATGAGCGCACCGGCAGCGGCGAGCAGCAAAGTCTTACGCTGGCCGACCACAGCCATATCC AGCTGAACAGTCGCAGCGCGCTGGATATCCGCTTCGACGAACATCAGCGCCGGCTGCTGCTTCATCAGGGTGAAATCTTGATCGAAACCGCCTCAGGCAA CGATCCGCGACCCTTTATCGTGGAAACCGAGCAGGGCGACCTGCGCGCCCTGGGTACACGTTTCATCGTTCGTCGCGAAAGGGACGCCACCCGCCTGATC GTGCTCCGCTCGGCTGTCGCCGCACTCCCGGGCGGTCTTCAGGCAGGCCGAACCCTGCAAGCGGGCGAGCAGGTGGTGATGTACCGCGACCATCTTGGCG ACAGCCAGCAAGCGCCCATTGCGGCGGACGCCTGGAGCCGCGGCATGCTGGTCGTCGAGGATCTGCCATTGAGTGAACTGCTGGCGAAACTGGGCGAGTA TCGCCACGGCTATCTCGGCCTCGACCCGAGTCTCGAATCCCTGCGTATCAGTGGCAGCTTTCCCTTGCATGACACCGACCGCGCGTTGGCCGCCCTGCCA CCCAGCCTACCGGTACGGATCGAACGGCATACCGATTGGTGGGTAAAGGTGGTGCCGACCGAGTCGGTCGCCCATCCCGGCGAATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TTGCAACACCTCTGCCCAGAAGGTGGTAGCCAGGTGATTCAAAAATATTTTCCTTGGCCTCTATCACTTTTCGATTCTGCTTCGGCTTGATGGATACTGA GACATATTCCTATTCGGGAGTTATTCACAAATGCAGCCGTTTGCTCTTTTCCGCCCTAGTCTTCTCGCCGTTGCCATTGCCATCGCGCCCTTGCCTTTGC TGGCACAGAGCCCCAACGCCGCGACGGTCAATGACGAGGTTCGCGAATACGCTTTGCCGGCCGGACCACTCGGCTCGACACTCAATCGCATCGCCGCGGA AGCGGGGTTGGTACTCAGCATTGATCCCGCACTGACCCGCAATCGCATGGCCGAGCCGGTAAATGGCCGCTTCGATGGCCAGGGTGCCCTGTCGCGAGCC CTGCGCGGCACCGGGCTCGAACTTCGTCAGAGTGCTTCGGGCAGCTTCAGCTTGCAGCAGGCAGCAACCGATGCGATGGCACTGCCGGATGTCACCGTGA
|
|
Amino Acid Sequence |
>amino acid ABC transporter substrate-binding protein
MNIDRQPVSSRVLDEAIAWQLRLGDETAGPHVNAELQRWLSDNAEHAKAWAQLGGIDQQLGSINSPSARHALQVSATSKRRRTTGRAFLGLVLLGTVGVG LTLQSQPLPVWLADERTGSGEQQSLTLADHSHIQLNSRSALDIRFDEHQRRLLLHQGEILIETASGNDPRPFIVETEQGDLRALGTRFIVRRERDATRLI VLRSAVAALPGGLQAGRTLQAGEQVVMYRDHLGDSQQAPIAADAWSRGMLVVEDLPLSELLAKLGEYRHGYLGLDPSLESLRISGSFPLHDTDRALAALP PSLPVRIERHTDWWVKVVPTESVAHPGE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|