Strain | Pseudomonas stutzeri strain 28a24, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GCGCGTGAGGAGCAGGTCGACCCGCTGACCCTCACCGGCTCCTACGCCGGCGCGATGGGCCTGCCGCAATTCATGCCGAGCAGCTTTCGCGCCTATGCCG TGGACTTCGACGCCGACGGCCATATCGACATCTGGAAGAACCCGGTCGATGCCATCGGGAGCGCCGCCAACTACTTCAAACAGCATGGTTGGATTACCGG TGCGCCAGTGGTGGCACGGGCGACCGTCAAGGGTGAGCGATACGAACAGGGCCTGACCGAGGGCCTCGAGCCGGTCAAGACTGCTGCTGAGCTGCGTGAG CTTGGCTGGCAATGGCAGGCCGAGGCGCAGACGGCTGACGATACCGCGGTGACGGCCTTCCGTCTGGACGGCGTCGAAGGCGACGAATATTGGGTAGGCT TGCCGAATTTCTATGTCATCACGCGTTACAACCGTAGCGTGATGTACGCCTTGGCGGTGCAGCAGCTCGCCGAGCAGATGGTTCAGGCGCGAGGCATGCC
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DNA Sequence for Gene |
>CH92_RS18360
ATGAGGATTCGTTTGTTGGTGGCGATAGCTGTCGCTGCCCTCGTTGCCGGTTGCTCCTCTTCGCCGACGTCGCAATCACCAGCGCCTGCTCCGAGTGCGG GTATGAGCGGCCCCGATGACTATTCACGGCCTCACAAGGACGGCGCTCCTTGGTGGGACGTTGACGTTTCCAGTATTCCCGATGCGACGCCAATGCCCCA TAACGGGGCGTTCAAGGCCAATCCCTACACGGTATTGGGCAAGACCTACTACCCACTCGGCGACGGCCGCAACTATCGAGCGACTGGCACGGCGTCCTGG TACGGCACCAAGTTCCACGGCCAGCCGACCGCCAATGGCGAGAAGTACGATCTGTACGGCATGAGTGCGGCACACAAGACGCTGCCGTTGCCCAGCTATG TGAGGGTGACCAATCTCGACAATGGCAAGACAGTGGTGCTGCGGGTCAATGATCGCGGTCCGTTCTACTCGGATCGAATCATCGATTTGTCCTTCGCGGC GGCGAAAAAGCTGGGCTACGCGGAAACCGGGACGGCACGGGTCAAAGTCGAAGGCATCGATCCCGAGCAGTGGTGGGCCGAGCGTGGCCGGCCGGTGCCA ATGGTGCTGGCGCAACCACAGAAAGTCGCCAGTAAACCCTCCGGTGCCTCGCTTGCACAGCCGGTCGAGCAGTACGCGCCACCGCCAGCGCAGCATGCAG CTGCAACCTTGCCGGTCCAGGTCGATCGCAGCGACAAGGCGGCTGCAGCCAAATCAGGCGTGTTTCTTCAAGTCGGTGCCTTTGCCAATCCGGACGCTGC CCAACTGCTGCGTGACAAGCTCAGCAGCATGACTACCGCGCCGGTGTTCGTAAGTTCGGTGGTTCATCAGGAGCAAATTCTTCACCGCGTGCGCCTTGGA CCGATTGACTCCGTGGATGAAGCCGCGCAGCTCGAACAGAATGTCCGCCTCGCCAATCTGGGAAGCCCCCGGCGAGTACGTGACGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGGGGCGTGTCACGTGGACAAGCGACACCGATCAACTTTAGCCCATCAATTTTTTGAGAGAACAATGACTATCACCACCTTCGTGCACCGCCTGTTTCTT CTCGCCGTGCTGGTCGTAGCGCCGGTAGCCTGGGCCGAGCCGATCATTCCGTCAGCGCCACAACTGGCGGCAAAATCCTACGTTCTGATGGATGCGGCCA GCGGTAAGGTGTTGGTCGAGACGGCGGGCGATGAGCGTCTGCCGCCGGCCAGCCTAACCAAGCTGATGACGGCTTACATCGCCACCCTGGAGATCAAGAA AGGTCAGATCTCCGGCAGCGACATGGTTACCATCAGCGAAAAGGCCTGGCGCACCGGCGGCTCGCGGATGTTCATTCAGGTCAACACGCAGGTTTCGGTC GACGATCTGCTGCATGGCATCATCATCCAGTCTGGCAATGACGCTAGCGTAGCGATGGCTGAGCATATCGCCGGCAGCGAAGAGGCCTTCGCGGACCTGA
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Amino Acid Sequence |
>lipoprotein
MRIRLLVAIAVAALVAGCSSSPTSQSPAPAPSAGMSGPDDYSRPHKDGAPWWDVDVSSIPDATPMPHNGAFKANPYTVLGKTYYPLGDGRNYRATGTASW YGTKFHGQPTANGEKYDLYGMSAAHKTLPLPSYVRVTNLDNGKTVVLRVNDRGPFYSDRIIDLSFAAAKKLGYAETGTARVKVEGIDPEQWWAERGRPVP MVLAQPQKVASKPSGASLAQPVEQYAPPPAQHAAATLPVQVDRSDKAAAAKSGVFLQVGAFANPDAAQLLRDKLSSMTTAPVFVSSVVHQEQILHRVRLG PIDSVDEAAQLEQNVRLANLGSPRRVRDD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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