Pseudomonas stutzeri 28a24, CH92_RS16365
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain 28a24, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ATCAACTGTGTTTGTGGGAATTCACGCATTTGCAGCAGGTATTCGATCGGCTCGCCGCCACCGTCGATTACCGGAGCGTCAACACTGCCAGAAACCGGCA GCACGCGCAGGTACAGGTCCGGCGCCATGCGCTGATTCAGGCGCAGCTCCTCTTCGCAGAAGTGCTTACGATCCGCCAGTTCGGTGAAGTTGAGGAAGCC GAAGTCGACCGGCTTCTTCATCTTGTAGGCGTAGGGTCCGGTGAGGATGACCCAGGATATGTGGGTCTCGATGACCCTGAAACCGTCGACCGGGTGGGGA TAGAGGGCCGGATTTTGCAACGCGGCGATCAATGCTTGGCTCACGGTCATTCCTTGCAGTTATTGGGCGGGGGGATGTGAGCCAATCGGGACGCGGATCA CATACTCGGAAAGCGCTTCATTATGTCTTTCTGAGCATGGCCTGCAAACCCGCCAAGAGGCCGTCTTCCGAGCAAATCAAAGTGCGTATAATGCGCCGCC
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| DNA Sequence for Gene |
>CH92_RS16365
ATGACTAAAGCACGCTCCTCTCGTTCCCGCTCCAAGCGCCGTTCCGGTGGCTCCCGTCCCTGGCTGGGTTGGGTGGTCAAACTATCCATTGTGGCCCTCG TGGTATTAGCCGGGGTGGCCGTTTACCTCGACGCCGTGGTGCAGGAGAAGTTTTCCGGCAAGCGCTGGACTATTCCCGCTACGGTTTATGCGCGCCCCCT TGAGCTGTTCGTTGGGCAGAAGCTCGCGAAGGAGGATTTCCTGACTGAGCTCGACGCGCTGGGTTATCGCCGCGAAAAAGCTGTCAATGGTCCTGGCAGC ATGTCGGTGGCCGCCAACGCTGTAGAGATGTATACCCGCGGGTTCCGGTTTTACGAAGGGGCCGAAGAGTCGCAGCGCATTCGGGTGCGTTTTTCCGGCG ATTTCGTCGCCGGTCTGACGCGGGCCGATGGTGGCGAACTTCCGGTGGCGCGTTTGGAGCCCGTCATCATCGGCGGGCTGTATCCCGCGCACAACGAGGA CCGAATTCTCATCAGGCTCGACCAGGCGCCGCCTTATCTTGCCGAAACGCTGGTTGCGGTTGAGGACAGGGAATTTTTCGATCACTTCGGTGTGTCGCCC AAGTCCATCGCACGGGCTGTCTGGGTCAATCTGACCGCCGGCGAAGTGCGTCAGGGTGGAAGCACACTGACCCAGCAGCTGGTCAAGAATTTCTATTTGA CCAATGAGCGCAGCCTCAGTCGCAAAGCCACCGAGGCGATGATGGCAGTGCTACTGGAGTTGCATTACGACAAGAAGGAAATTCTCGAGGCCTACCTCAA TGAGGTGTTTCTCGGGCAAGACGGTCGCCGGTCCATTCATGGGTTCGGCTTGGCCAGTCAATATTTCTTCGGTCGTCCGCTCGCCGAATTGAAAGTGCAG CACATCGCGCTGCTGGTCGGCATGGTAAAGGGGCCCACCTACTACAACCCGCGACGTCATCCGGAACGAGCATTGGAGCGTCGAAATCTTGTACTCGACC TCTTGGCGGAGCAGCAGGTCTTGACGCCCGAAGAGGCAGCTGCGGCACGGCAGACTCCGCTTGGGGTCACGCAGCGGGGCAGCCTTGCCGACAGCTCTTA TCCGGCCTTCCTTGATCTGGTTAAACGCCAGCTGCGCGAGGATTACCGCGACGAGGATTTGACCGAGGAAGGTTTGAGGGTCTTCACCAGCTTTGATCCG ATCCTCCAACGCAAGGCCGAACAGGCCATGACGGAAACGCTGAAGCGACTTGGCAAGGCGGCGGAGGGTGTCGAGGGGGCGATGCTGGTCACCAATCCAG AAACCGGAGAGCTTCAGGCGATGCTCGGTAGTCGTCGACCGGGCTTTGCCGGGTTCAACCGGGCACTGGATGCTTCGCGACCCATCGGGTCGCTGATCAA ACCGGCCATCTATCTCGCGGCGCTGGAAAAGCCTAGCCAGTACACCCTGACCAGTCTGTTGGACGATGAACCGTTCTCGGTCAAAGGTGCCGATGGCCAG GTATGGAAACCGCAGAATTATGGGCGCACCGCGCACGGTACGGTTTATCTCTATCAGGCGCTGGCCAATTCTTACAATCTGTCCACCGCGCGCTTGGGCC TGGATCTCGGGGTCCCGCATGTGCTGAAAACCCTAGAGCGATTGGGGGCTTCGCCGCAGTGGCCGGCTTATCCCTCAATGCTGCTGGGGGCGGGTGGTCT GCGGCCGATCGAAGTCGCCGGCATATACCAGACGCTCGCTAATGGCGGTTTCAATACGCCGCTGCGCGGTATTCGCAGCGTTGTGGCTGCTGACGGTGAG CCGCTCAGTCGCTATCCGTTCAAGATCGAGCAGCGTTTCGATGCTGGCGCGATCTACCTGACTCAGTACGCCATGCGGCGTGTCATGCTCGAAGGTACGG GTCGCTCAGCCTACAATTACGTGCCGAAATCGTTGGCGCTGGCGGGCAAGACCGGTACCACCAACGACTCACGCGATAGCTGGTTCGCCGGGTTCAGTCA GGACCTGTTGGCAGTGGTTTGGCTGGGTCGTGACGATAACGGTAAGACGTCGCTGACCGGTGCGACTGGAGCATTGCAGATTTGGGCGGATTTCATGCGC CGAGCCGATCCATTGCCACTACAAATGCAACTGCCCGAGAATGTCGAGCTTGCCTGGGTGGATGCGCAAACTGGGCAAGGGACGTTGGAAAATTGCCCTG ACGCCGTGCAGATTCCCTACATTCGCGGCAGCGAGCCCGCGCCGGGACCCGGTTGCGGTATCCGGGCGCCAGCTGAGTCGGTCATGGATTGGGTTCGCGG TTGGCTGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTGTTCTCAGCTGAATGGAATTTCAAGAGGTTCGAATTTTGAGCAAGCAATGGATGATGGTTGTGGCGATCGCTGCGCTGGTGCAGGGGTGTGCAACGGT AAAGCGAGGGGCGATACCCGTCGTCGATTCGGGTGCGCCGGTGTCCGAGGAGGTCTCGGCGCGGCAGCCTTATCGAGCTACTGGTCCTTCTCTTTCCACC GCGCAGCCTGCACAAGATGCAAGCGTCATGGTCATGGTGCCGCAGCAGAATTCGGAGCCATTACAGACCTTCGCAGCGCCGGATGCTGCGTTCTCCGGGA CTTCGGATCCGGTGCCGGGCGCGCCTGGGCAGTGGAGTGCTCCTCAACCGGCTCCAGCGCCGGCATCAGCACCAAGCCAGTCCATGCCGAGCGGCATTCC GTCGAATAGCGGAACGCTGTCGGCTGACGAGCGGCTTGATGGGCCGGTATTGGCGTTACTCACTACGGCTCAACAACAACAAGGCGGAGGCGACCTGAAC
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| Amino Acid Sequence |
>penicillin-binding protein
MTKARSSRSRSKRRSGGSRPWLGWVVKLSIVALVVLAGVAVYLDAVVQEKFSGKRWTIPATVYARPLELFVGQKLAKEDFLTELDALGYRREKAVNGPGS MSVAANAVEMYTRGFRFYEGAEESQRIRVRFSGDFVAGLTRADGGELPVARLEPVIIGGLYPAHNEDRILIRLDQAPPYLAETLVAVEDREFFDHFGVSP KSIARAVWVNLTAGEVRQGGSTLTQQLVKNFYLTNERSLSRKATEAMMAVLLELHYDKKEILEAYLNEVFLGQDGRRSIHGFGLASQYFFGRPLAELKVQ HIALLVGMVKGPTYYNPRRHPERALERRNLVLDLLAEQQVLTPEEAAAARQTPLGVTQRGSLADSSYPAFLDLVKRQLREDYRDEDLTEEGLRVFTSFDP ILQRKAEQAMTETLKRLGKAAEGVEGAMLVTNPETGELQAMLGSRRPGFAGFNRALDASRPIGSLIKPAIYLAALEKPSQYTLTSLLDDEPFSVKGADGQ VWKPQNYGRTAHGTVYLYQALANSYNLSTARLGLDLGVPHVLKTLERLGASPQWPAYPSMLLGAGGLRPIEVAGIYQTLANGGFNTPLRGIRSVVAADGE PLSRYPFKIEQRFDAGAIYLTQYAMRRVMLEGTGRSAYNYVPKSLALAGKTGTTNDSRDSWFAGFSQDLLAVVWLGRDDNGKTSLTGATGALQIWADFMR RADPLPLQMQLPENVELAWVDAQTGQGTLENCPDAVQIPYIRGSEPAPGPGCGIRAPAESVMDWVRGWLP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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