Pseudomonas stutzeri 28a24, CH92_RS14535

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri strain 28a24, complete genome. [Details]
DNA Sequence Upstream of Gene
GCAGCTGCCCGAAGACTGCCAGGTGCTTGGCAATCTCAACGCATTGGCGCAAGCCATGGAGAACATTCTGCGCAACGCCATTCGCTATTCCCCTGTAGGA GGAACCGTTCGCCTGTCGGCTGATCGCGACGGCGTCCACTGGCGGCTGCGCATCGAGGACCAGGGGCCGGGCGTGCCTGCCAACCAGCTGCCGGTGATCT TCCGCCCCTTCGCTCGACTCAGCGCGGCCCGCCCCGGTGGTGATGGTTTCGGCTTGGGCCTTGCGATCGCCCGCGGCATGGTTCAGATGCAGGGCGGCGA CATCTGGGCCCAAAACAGCGAGTCCGGCTTGCGCATGACCATCCGATTGCGAAGTGTATAGATTGTAAATGAGCTTTACTCTCAAATGAGAATACTTAGC ATTGCGAACGGCGCGATAGCCGCTTGAAGGTAACGCGCTTTTTTTGCGGCCCCTTTTCGGTCGCCGACTAACAATGCATAAGCTCAGGGAGAACGCGGGA
DNA Sequence for Gene
>CH92_RS14535
ATGGTAGTTTTCAATCGAAGCCGGCTGGCTGGCGCCATCGCCATGGCAACCTGGATGAGCGCAACGGCCCAGGCACAAGAGCCGATCGAACTACAGCCCA CCACGGTGGTGACCGCTGCGGGTTTCGAGCAGAACATCGCAGAGGCTCCAGCCAGTATTTCGGTGATCACCCGCGAGCAGCTTGAAGAACAGTCCTACAC CAGCGTTCTCGATGCAATGAAAAACGTTCCAGGCGTGTATGTCTCCGGCGGCGGTAATCAGCAAGACATCACTATTCGCGGCATGGGCAGCGAATACACC CTGGTGCTGGTGGACGGACGGCCAATCTCTGCAGGTCGCCAGACCCAGACCAACGGAACCTCTGGCGGCAAGCAGCAGCTGGCGTTGCCACCCCTGGCCA TGATCGAGCGCATCGAAGTCATCCGCGGCCCGATGTCCTCGCTGTACGGTTCAGAAGCCATGGGCGGCGTCATCAACATCATTACCCGCCAGTCCACCAA CGAATGGGCAGGGACCGTCCGCGCCCAGAAGATGTTCTCCCAGAACGATTACAACGACGACGAATACCACACCGAGCTGTTCGCCGGTGGCGCGCTGATT CCCGGACTGATGGGCCTGCAGCTGAGCGGCGCCTATACCCACACTTATGAAAGTGATTACGTCGGCGGTGAATCCTTCAATTCCGGTGAAAGCAAGCCGG AAACCCGCGAGAGCAATGTCGGCGCTGACTTGTTTATAACGCCCACCGAAGCCGACCGGTTCACCCTTGGCTATCGCGAAGTTACACAGAAATCGCGGCA TACCGCAGGCAAGAGTTCGCCTGTAACCGATACCCTGCTGGAGGGGCAGGCATCGACCAACCGCTTCGAGAAGGAAGTCTGGACGCTGTCGCACGACGGC AACTATGGCGGCTGGCTGATGAATAGCTATCTGCAACGCGACGTGTCCGAGCGGGTGCAGGACCTGTCGATGGAAGAGACCGTCAATCTCTTCAACACCC AGGGGACTTTTTTCTGGGGCCAACACACGATCACCCTCGGCGGACAGTACAAGGACGAAGAGTTCGTCAATGGCCAGAACGTGCTGTTCAACGATGGCAT CGCAGGGGGCGTACACGAAGCCGATCGCTGGCTGGCAGCGATCTACGGCGAAGTGGAATGGGGCATTACCGAAGACTTCTCGTTGACCACCGGCTTGCGC TACAACGATGACGAGTTCTTTGGTGGTTACCTATCCCCCCGCATCTACGGCGTCTACAGCCTGATGCCAACCCTGACTCTGAAAGGTGGCGTTTCGACTG GCTACAAGCAGCCGTCTCTCACTCAATCCACCGAAGGCTTCGGTGGCCGTACCGGCGGCGGTGGCTCGCCAAACGTAGGCGCCAATGGTCAATCGCTGCC ACGCGCGCTGAGCATCGGCAACGCCGATCTGGAACCGGAAACCAGCACCAGTTACGAAATCGGTTTCGTATTCGATGATCCATCAATCGGCCTGGGTTCC AGCGTGATGGTGTTCCATACGGTCTACAAAGACAAAATCGCAGAAGATCGCTTCTGCACTAGCCCGAATGCTGCTAGCAACAACGACGTTGCCAATTACG CCTGTAACTTCGGTGGCAACAACTTCTACTTCCTCAGCACGACCCGGAACATCGATGAAGCCGTTATCCAGGGTGTGGAATTCACCCTCGACTACGACAT CACCAACGACCTGACCTGGATGAGCAGTTATACCTTTACCGACTCCGAACAGAAGACCGGTGAGTTCAAGGGTGAGCCGCTCAACAAGCAGCCCCGGCAC ATGTTCAACACCAATCTGGATTGGCGCGTTTCGGACAAGCTTAACCTGTGGTCGCAGTACAACTACCGCAGCCGTACCTCCGATTACCTGAGCCGTACCA GCATGAGCGAAGGCACGCCGGGCTACGGGTTCGTCGACATCGGCGCGGTGTACGGAGTGTCCCGTAACGTCGACCTGACTGCCGGGCTCTACAACGTGGC AAATAAGGAAGTGACCAATGACGATTACGCCGTGGTGCTCGACGGTCGCCGCCTGGTCGTAGGCATGTCGGTCGACTTCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACAACAGATGCGGTAAGGGGCGCGGCCTGGAAGGCGCGCCACGCCGCTTCGAATTGACTGCCCGACCGGCTGATAAAGCCAGTGTCGGGCGTTTTCGTAT GACTTCAGCTGTTCCTATTGGGAGCCTGTCGTGACTCGTTCCGTATCGCAATCGAGAAATGCATGGCCTGAAATCGCCATCCGTACTGCGCTCGCCATCC TAGGCGGCTACGCCTTCACCTACGCATTCACTGCGGCCCTGGCGCAGGTGTTGCCGTTGGATAAGGTCGATGCGCTGGCGATCTCTTCTCTGCTGTCTTT CGTGATCTATCTGGCCTTCATTCTCTGGGCCTTTGCCGCAGCTTCACTTAAGCGCGTGCTCGTTGGCGTGTGCATGGCGTTGCCACTGGCAGCCATCGGC TTCTGGCCTCAGCTGTTGGGAGCACTGAAATGAAAGGCACCCTGACGCAATCCATGTCCTGGCTCCATACCTGGTGCGGGCTGCTGCTCGGCTGGGTGCT
Amino Acid Sequence
>ligand-gated channel protein
MVVFNRSRLAGAIAMATWMSATAQAQEPIELQPTTVVTAAGFEQNIAEAPASISVITREQLEEQSYTSVLDAMKNVPGVYVSGGGNQQDITIRGMGSEYT LVLVDGRPISAGRQTQTNGTSGGKQQLALPPLAMIERIEVIRGPMSSLYGSEAMGGVINIITRQSTNEWAGTVRAQKMFSQNDYNDDEYHTELFAGGALI PGLMGLQLSGAYTHTYESDYVGGESFNSGESKPETRESNVGADLFITPTEADRFTLGYREVTQKSRHTAGKSSPVTDTLLEGQASTNRFEKEVWTLSHDG NYGGWLMNSYLQRDVSERVQDLSMEETVNLFNTQGTFFWGQHTITLGGQYKDEEFVNGQNVLFNDGIAGGVHEADRWLAAIYGEVEWGITEDFSLTTGLR YNDDEFFGGYLSPRIYGVYSLMPTLTLKGGVSTGYKQPSLTQSTEGFGGRTGGGGSPNVGANGQSLPRALSIGNADLEPETSTSYEIGFVFDDPSIGLGS SVMVFHTVYKDKIAEDRFCTSPNAASNNDVANYACNFGGNNFYFLSTTRNIDEAVIQGVEFTLDYDITNDLTWMSSYTFTDSEQKTGEFKGEPLNKQPRH MFNTNLDWRVSDKLNLWSQYNYRSRTSDYLSRTSMSEGTPGYGFVDIGAVYGVSRNVDLTAGLYNVANKEVTNDDYAVVLDGRRLVVGMSVDF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site