Pseudomonas stutzeri 28a24, CH92_RS13940 (flhF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain 28a24, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGGTGCTACAGGCCTTGCTGCAAGAGCAGGTGCCTGTTCGTGACATCCGAACCATTGCCGAGGCCATCGCCAACGTCGCGGTCAAGAGTCAAGATCCCGC CGCGATGGTCGCTGCGGTGCGTGTCGCGCTGTCCCGCGCAATCGTGCAAAACGTTGTGGGGCTTGAGCCGCAGCTACCTGTCATCACGCTTGAGCCAAGG TTGGAACAGATATTGCTCAATAGTCTTCAGAAGGCAGGACAAGGATCGGAAGATGGCATTCTCCTCGAGCCGGGAATGGCCGAAAAGTTGCAACGTTCCC TGGTAGATGCGGCACAGCGTCAAGAAATGATGGGTAAGCCGGCGATTCTGCTGGTGGCAGGTCCGGTCCGCGCAATGTTGTCGCGATTCGCTCGACTCGC CGTACCGAACATTCATGTCCTGGCCTATCAGGAAATACCGGATAACAAGCAGGTCACCATCGTATCGACGGTGGGTCAGAATTAACCGAGGGTAAAGGCC
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| DNA Sequence for Gene |
>CH92_RS13940
|flhF
ATGCAGGTCAAACGTTTCTTCGCAGCCGACATGCGTATCGCCATGAAGATGATTCGTGACGAGCTGGGCGCTGACGCCGTGATCACGGGCAACCGTCGTG TTGCTGGCGGCGTCGAGCTGACCGCTGTGCTTGATTACCCGATGGATACCGCGCCCAAGCAGCCAAACCCGGCGCTTGAAGCCGAGCTGCGCAAAACCCA GGCGCGGATCGCTGACGCCCATGCCGAGCTGAGCGCACCGTCGCGCGCCCAGCCGAGCAAGGATCGTCAACTGCTTGACGAGAAGCCTGCCGCAATCGCT CAGCCCAAGCCTGTTGCCGCTCCGGCAGCTGCCGACTCGCGAGCGATGGAAGCCATGCAGTCCGAACTGCAGGGGCTGCGTGAGCTGATCGAAATGCAGC TCGGTTCGATCGCCTGGGGACAAGAGCAGAACCGTCGCCCCCAACAGGCCAGCCTCTGGCGCCGGTTGCAGCGCATCGGCCTGCCCGCCGAGCTGTCGCG CGCGTTGCTGGACAAGGTTTCGGCAGTGTCCGAGCCGCGCCAGGCCTGGCGCATGGTACTGGCGCACCTGGCGCAAGCGATCAAGGTGACCAAGGTCGAG CCGCTGGAAGAGGGTGGAATCATTTCGTTGGTAGGTCCGGCCGGTGCCGGCAAGACCACGACGCTGGCCAAGCTCGCGGCGCGGTATGTGCTCAAGCACG GCGCGCAGAGCATTGCGCTGGCGAGTATGGACAACTTTCGCATCGGTGCGCAGGAGCAACTGAAGACCTTGGGTCGCATTCTCGACGTCCCGGTCATTCA GGTTGACCCTACGCAGCCGTTGAGCAAAACGCTTGCGCCGATGGCGCGCAAGCGTCTGATTCTCATCGACACCGCTGGCCTGCCGGCGAATGATCCGATG ATGCGCGCTCAGCTCGAGGCGCTGGCCGACCGCGGCGTCAAATCAAAGAACTATCTGGTGCTGCCCGCCACGAGCCAGAGCCAGGTTCTCAAGGCGACCT GGCACAATTACCGCCGCTGCGGGCTGGCGGGCTGCATTCTGACTAAACTGGATGAAGCCGGAAGCCTGGGCGATGTGCTCGGTCTTACCATCAGCCAACA TCTGCCCATCGCCTACCTTGCCGATGGGCCGCGCATCCCCGAGGATCTGCATCTGCCGCGCAGCCATCAACTGGTTAGCCGGGCAGTGAGTCTGCAATCG GAGGAGACTCCCAGCGAGGAAACCATGGCCGACGTGTTCTCCGGTCTGTACAACGGTGGTTCTTCACGGAAGGTCGGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGCTTTGCTCCGTGAAACATACAAAGAAGACGCGTTCGGGCTGAACGCATCGATGGCCCTAGGGCTCCAGCAAGAGATAGGCGTGTGAAAATGGGCATT CATCCCGTACAGGTTATTGCAGTTACCGGTGGCAAAGGTGGCGTAGGCAAGACCAATGTGTCGGTCAATTTATCGCTGGCGTTGGCAGAACTCGGTCGCC GGGTAGTGTTGCTCGATGCCGACCTTGGACTGGCCAATGTCGACGTGCTGCTGGGTTTGACGACCAAGCGCACATTGGCCGACGTCATTGCAGGCGAGTG CGATTTACGTGACGTATTGATTCAGGGGCCGGGCGGTATCCGCGTCGTGCCCGCGGCATCTGGTACGCAGAGCATGGTGCAATTGTCTAGTCTGCAACAT GCGGGGCTGATTCAGGCATTCAGCGATATCGGCAAGGATATCGATGTGCTGATCATCGACACCGCAGCAGGCATTGGGGATGGTGTTGTGAGTTTCGTCC
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| Amino Acid Sequence |
>flagellar biosynthesis regulator FlhF
MQVKRFFAADMRIAMKMIRDELGADAVITGNRRVAGGVELTAVLDYPMDTAPKQPNPALEAELRKTQARIADAHAELSAPSRAQPSKDRQLLDEKPAAIA QPKPVAAPAAADSRAMEAMQSELQGLRELIEMQLGSIAWGQEQNRRPQQASLWRRLQRIGLPAELSRALLDKVSAVSEPRQAWRMVLAHLAQAIKVTKVE PLEEGGIISLVGPAGAGKTTTLAKLAARYVLKHGAQSIALASMDNFRIGAQEQLKTLGRILDVPVIQVDPTQPLSKTLAPMARKRLILIDTAGLPANDPM MRAQLEALADRGVKSKNYLVLPATSQSQVLKATWHNYRRCGLAGCILTKLDEAGSLGDVLGLTISQHLPIAYLADGPRIPEDLHLPRSHQLVSRAVSLQS EETPSEETMADVFSGLYNGGSSRKVG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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