Strain | Pseudomonas stutzeri strain 28a24, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TGAACAGCTCGACAGACACTCACCCCAACAGCGATACGGGCATTGTCGGGCCGCACCGTCCAGCCGGCAGGACATGGCGGACGTCGGTGTGTATCGATGG GTGAGCATGTCCAGGTTTCCGGGCATATTGAATGGACGTAGCGAGTAGCGAGCCGCACGGCACCTTGGTCGCAGAGCGCTCTTTTCACGGCATCCCAGCC TTTTCACCACCTTTGCCCGGGTCTGGCACGGCTTTCGCTCTTGGTTTTCCACGGTCTCGCTTGTTATCCCAATCGCACCGCGAATGCGGGGCCGACTGGC GCGCGGGACGACTAGAACAATAAGGAAAACCGCATGAATGCCTTACTGGAACTTCCCGCAGGAGCGATCGCCGGCCTTGTGCCGTCCCGCTTTGTCATCG CCCCGAACAGCGCCCTTCGCCGCAGCCGCTATTCTGATCGTCAGCAAGGTGCCTTCTGCGCCGACGCTCTGACCGTCACTCGTCGCTATCGGAGACAGAC
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DNA Sequence for Gene |
>CH92_RS10420
ATGATTTTGAACGGCAAAACCGCCCTGGTCACCGGTTCGACCAGTGGCATTGGCTTGGGCATCGCATGCAAGCTGGCGGAGGCGGGCGCCAGCGTGATGC TCAACGGTTTCGGCGATGTGGAGGCCGCTATCGCTCGGGTGTCAATGTACGGCACGCGCGTCTTGCATCACCCAGCCGATGTATCCGATGCCGAACAGAT CGGCGACATGATCAGCCAGACCGAACGTGACTTTGGCACCCTTGACGTGTTGGTCAACAACGCCGGAATTCAGCATGTTGCGCCGGTCGAGCATTTCCCG GTCGAGCGCTGGAATAGCATCATTGCCATCAATCTATCCTCGGTATTCCACACCATGCGCCTGGCGTTGCCGGGCATGCGTGAGCGCAATTGGGGGCGGA TCATCAACATATCCTCGGTGCACGGTCTGGTGGCCTCGGCACAGAAGGCCGCGTACGTGGCCGCCAAGCATGGTGTGATCGGGCTGACCAAAACGGTCGC GTTGGAAACCGCAACCACTGGTATCACCTGCAACGCGCTTTGCCCCGGCTGGGTGCTGACGCCACTGGTGCAGCAGCAGATCGATAGCAAGGCCCAAGTT CATGGCGACCCGAGCCGAGCCACCCGTGAGTTGCTGATGGAGAAACAGCCCTCGCTGGATTTCGTCACACCGGAGGAGCTGGGTGATCTGGCGCTGTTTC TTTGCAGCGACGCAGCCCGGCAGGTGCGCGGAGCGGCCTGGAATGTCGATGGCGGGTGGTTGGCGCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGAATACACCGGCGAAACCCATGGCTGCCGTCGCCACAAACTTCGCGGATTCAGGCGAATCCATATGGCCGGATCGTGCCTGCGCTCCTGCATGGGCAC GCCCCTGGAGTGCATTGCGCTGGACGAAGGTCCGGTGAGCAATGCGTATGAGGCTCTGCAGGGCTAAAACAACCGAAAGTAGCGGTGGGCCGGCAACATA CAAGTGATGGCGCGGTGAGGCTCGAACTCACAGCTGTGATGCGCCGCGCCGTCCGAGTGGCTATCGCAACGACCTACCGCTCGCTCAATCCATGCAATTG AAGCTTGGAATACAGGCTGGCGCGTGAAATACCCAGCTCCACAGCGGCGCGGCGGCGATTGCCTTTGCAGGCGCGCAGCGCGTGTTGCAGCGCTCGGCGT TCGGCCTGAGCAACGCTTTCAGCCAGTAGCTGCAGCGGCGAGTCTTCCAGCATCGGCAGTTCGACGGCGGGCATTACCGGCTCTGTCAGCGGTGCGGCCC
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Amino Acid Sequence |
>3-hydroxybutyrate dehydrogenase
MILNGKTALVTGSTSGIGLGIACKLAEAGASVMLNGFGDVEAAIARVSMYGTRVLHHPADVSDAEQIGDMISQTERDFGTLDVLVNNAGIQHVAPVEHFP VERWNSIIAINLSSVFHTMRLALPGMRERNWGRIINISSVHGLVASAQKAAYVAAKHGVIGLTKTVALETATTGITCNALCPGWVLTPLVQQQIDSKAQV HGDPSRATRELLMEKQPSLDFVTPEELGDLALFLCSDAARQVRGAAWNVDGGWLAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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