Pseudomonas stutzeri 28a24, CH92_RS08705
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0016746 | transferase activity, transferring acyl groups |
Inferred from Sequence Model
Term mapped from: InterPro:SSF53901
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pstt00780 | Biotin metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pstt01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pstt01212 | Fatty acid metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pstt00061 | Fatty acid biosynthesis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.40.47.10 | - | IPR016039 | Thiolase-like | 6 | 257 | 6.6E-61 |
| Pfam | PF00109 | Beta-ketoacyl synthase, N-terminal domain | IPR014030 | Beta-ketoacyl synthase, N-terminal | 1 | 244 | 5.4E-45 |
| Gene3D | G3DSA:3.40.47.10 | - | IPR016039 | Thiolase-like | 258 | 404 | 3.8E-44 |
| SMART | SM00825 | Beta-ketoacyl synthase | IPR020841 | Polyketide synthase, beta-ketoacyl synthase domain | 4 | 405 | 3.6E-13 |
| FunFam | G3DSA:3.40.47.10:FF:000005 | 3-oxoacyl-[acyl-carrier-protein] synthase I | - | - | 258 | 404 | 5.8E-80 |
| FunFam | G3DSA:3.40.47.10:FF:000006 | 3-oxoacyl-[acyl-carrier-protein] synthase I | - | - | 6 | 257 | 0.0 |
| SUPERFAMILY | SSF53901 | Thiolase-like | IPR016039 | Thiolase-like | 213 | 403 | 2.34E-60 |
| CDD | cd00834 | KAS_I_II | IPR000794 | Beta-ketoacyl synthase | 2 | 400 | 0.0 |
| Pfam | PF02801 | Beta-ketoacyl synthase, C-terminal domain | IPR014031 | Beta-ketoacyl synthase, C-terminal | 252 | 359 | 1.0E-28 |
| PANTHER | PTHR11712 | POLYKETIDE SYNTHASE-RELATED | IPR000794 | Beta-ketoacyl synthase | 1 | 401 | 5.9E-107 |
| SUPERFAMILY | SSF53901 | Thiolase-like | IPR016039 | Thiolase-like | 1 | 251 | 6.4E-60 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.