Pseudomonas stutzeri 28a24, CH92_RS08250
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain 28a24, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCAGTGCCTGGTTTACCGCCAGCCAGCCTGTCACCGCATCTTCGCCCACCTGCTTGAACGCTCGCTCGAACAGGCGCACCTGTTCGCGTCTGAGTACCTG CTCCAGTTTGGCGCCTTCGGGGGTGAAGCGCAGCATGCGCTTGCGCTTGTCGTCCTCCGCCGTTCTGCTTTCGACCAAGTGCATTTCGATAAGCTGTCGC AGCGGTATGTTCAATGCCTGCTTGCTCACGCCCAGGTATCCGAGCAGTTCCTTGACGCTGAGGTCGGGATAACTGGCGATGAAGAACAGAACGCGGTGGT GCATCCTGGATAGGCCTCGGCGCGCGAGCATTTCGTCCGGCTTGGCGGTGAAGGCCTGATAACCGAGGAAGAAATTTTCCATGATCTGGCGTTGAATCGT GCTTTTTTTTAGGTCAGGCATATTGACGTATTCGCGGCGGTGGGCGTAATTTTGGTCAAGTAGTTTGACTCATTTTATTCCTTCCTGCATCTGGTGCCCC
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| DNA Sequence for Gene |
>CH92_RS08250
ATGGCCTTCTCCGAACGTGTCGACCGCCTGAAAAGCTCGCTGATCCGCGAAATCCTTGCCGCAGCGCAGCGTCCGGAGATGATGTCGTTTGCCGGAGGGC TGCCTGCCGAGTCGATGTTGCCCAAGGTCGACTGGGCGCAGATGCCGGCGAGCATGGGGCAGTACGGCATGAGCGAGGGCGAGCCGGCACTGCGCGAAGC CATCGCCGCCGAAGCGCGCGAACTCGGCGTTGATTGCTCCGCTAGCCAAGTGCTTATCGTCAGTGGTTCTCAGCAGACGTTGGATCTCGCATCGAAGCTG TTCATCGACGTCGGTACCGAGGTGCTGCTCGAAGCCCCGACCTATCTGGCTGCGCTTCAAATCTTTCAATTGTTCGGTGCGGACTGTCTGGCTGTGCCAC AAGAGACCGACGGTCCATCGTTGGTCGCGTTGCGCCAACGGCTGGAGCAGCACAAGCCAGCGTTTGCCTACATGATTCCGACTTTTCAAAATCCCTCCGC GGTGCGTTACAGCGAAGAAAAGCGCGATGCGGTCGCGGCTATGCTCGACGAGTTCAATGTAGTCCTGATTGAGGATGAGCCTTATCGCGAACTGGTTTTC GACGAAAGCAGCGCCAGGCCCATCGTCAGCCGCATGCGCAAGGCAAGCTGGATATATACCGGCACAGTCTCCAAGACGTTGCTGCCAGGGCTGCGGGTGG GTTACCTGATCGCAACGCCCGATCTTTTCCCCCTCTTGCTGCGGCTTAAGCAGTCGGCTGACCTGCACACCAACCGCATTGGTCAGTGGCAGGCGCTGCA GTGGTTGGGAAGCGAACGATATCGTTCGCACCTGAGCGAACTACGCCGCTTCTATCGTCTGCGTCGCGATGCGATGCAGGTTGCGTTGGAGGAGCATTTC GGCGATCTGGCCAACTGGCAGGTCCCGCAGGGCGGTTTGTTCTTCTGGTTGCAGCTGAAACGCCCTATCGACACGCGAACCTTGCTCAGGCCGGCCCTGG AACAGAATGTGGTATTCATGCCAGGTGAGCCTTTTTTCATCGATCCCGAACAGAATCTCGGCTATCTGCGGCTGAACTTCAGTCATGTCGCTCCGGAGCG GCTGGACGAAGGCGTGCATCGGTTGGCTAAAGTGGTTCGCGGGTACGAGATGGTCGATGCGGCCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCAAGGCGCGGGTGCTTGCGTTGCGCAGGAGGGGGAGATGTACAAGGTTTACGGCGATTATCGTTCCGGTAACTGTTACAAGGTGAAGCTGATGCTGCAT CTACTCGGGCGAGATTACGAGTGGGTGCCAGTAGACATTCTTCGTGGTGAGAGCCGTGAGGACGCGTTTCTGAAGAAGAATCCCAACGGCAAGATTCCCG TGCTCGAACTGGAAGACGGTACCTGCTTGTGGGAGTCGAACGCGATTCTCAATTACCTCGCGGAGGGATCCGAGCTCTTGCCCACGGATCCGCGTCTGCG CACCCAGGTTCTACAGTGGCAGTTCTTCGAGCAGTACAGCCATGAGCCGTTTATTGCTGTAGCGCGATTCATCAAGGTTTATCTGGGGTTGCCCGATGAT CGCCTCGATGAGTATGCGGCCAAGCAACTGGACGGCTATCGCGCGTTGGATGTCATGGAGCAGCAACTGCAGCGCACGCCGTTTCTCGTTGGCGACCGCT
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| Amino Acid Sequence |
>GntR family transcriptional regulator
MAFSERVDRLKSSLIREILAAAQRPEMMSFAGGLPAESMLPKVDWAQMPASMGQYGMSEGEPALREAIAAEARELGVDCSASQVLIVSGSQQTLDLASKL FIDVGTEVLLEAPTYLAALQIFQLFGADCLAVPQETDGPSLVALRQRLEQHKPAFAYMIPTFQNPSAVRYSEEKRDAVAAMLDEFNVVLIEDEPYRELVF DESSARPIVSRMRKASWIYTGTVSKTLLPGLRVGYLIATPDLFPLLLRLKQSADLHTNRIGQWQALQWLGSERYRSHLSELRRFYRLRRDAMQVALEEHF GDLANWQVPQGGLFFWLQLKRPIDTRTLLRPALEQNVVFMPGEPFFIDPEQNLGYLRLNFSHVAPERLDEGVHRLAKVVRGYEMVDAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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