Pseudomonas stutzeri 28a24, CH92_RS07960
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain 28a24, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGGTCTGGCTGTCACCGCCCAGATGCAGAGCCTGCTGACTCCAGAAATGCGCCTGCTGGGGCCGGCCGAAGGATTTCCGGAACTGCCGATCAGCAGCA CGGTGCTGCTGCGCAACGATCGCAGCCAGTCGCAGGTCAGTGAGACATTGGCCGAGCATATTGTTGAAGGTTTCCGTCTCTAGCCGCCCGCCGCGGTAGC GCGGACGAGAGCCCGGATAGCGAACCGGGCATTGCTATCTCGGGCCTGATTGATTGTCATCCGAGTGTGTTTTTCTTTCTTAAGCCGCGGTTGCTCAGGT TTCGCGGTTTGACCTCGACGCATTTGTTTGTTTTGGTGTAAAGCCAGACTGACCTAGCAGGACTTGATTCAGGCGGCTCGACGGCACCCCTGCCGTTCCG CAGATAGCGGTCCAGAGCGGTACGCGCTGGTCTGATAACCTGAACTTCACGTTCCGTGCGTCAGTCACACTCCCCAACGGCAGAAACCGGTAAGGACCTT
|
|
| DNA Sequence for Gene |
>CH92_RS07960
ATGTGCGGCATAGCTGGCGAACTTCGCTTCGATAATCAACCGGCCGATCTGGCCGCTGTTGAACGCATCACCCAACACCTGACTTCTCGTGGACCCGACG CGTGCGGTTTCAACAGCCAGGGCCCTGTGGCGCTCGGCCATCGCCGTCTGAAAATCATGGATCTGTGTGAGGCGTCTGGTCAGCCGATGATCGACTCGGC ACTGGGCCTTTCGATGGTCTTCAACGGCGCCATCTACAACTACCCAGAATTGCGCGCCGAGCTGGAGGCGCTGGGCTACAGCTTCTTTTCCGAAGGCGAT ACCGAGGTGCTGCTCAAGGGGTTCCATGCTTGGGGGGACGCCTTGTTGCCGCGGCTCAATGGCATGTTCGCCTTCGCCATCTGGCAACGCGACCGGCAGG AGCTGTTTATCGCCCGTGATCGCCTGGGAATAAAACCGCTCTATCTGTCGAAAACCGGCGATCGCCTGCGCTTCGCCTCCGCCCTGCCGGCATTGCTCAA AGGCGGCGATATCGCCGGTGTGCTGAATCCGGTGGCGCTCAATCACTATATGAGTTTCCACGCGGTGGTACCGGCGCCGGACACCCTCATCGCCGGCATC GAGAAACTGCCGCCGGGCACCTTCATGCGCGTCGATGCCAGCGGCAAAACCAGCCAGCATCGCTGGTGGACGCTCGAATTCGGCGCAAGAGACGACGAGC AGAACTACAGCTTCGAGGATTGGCAAGAGCGCACCTTGGCCACCCTTCGTCAGTCGGTCGCCTTGCGCCAACGCGCGGCCGTCGATGTCGGCGTGCTGCT TTCGGGGGGCGTCGATTCCAGCCTGCTGGTCGGCCTGCTGCGTGAAGCCGGCGCGGCGGACAACCTGCTGACCTTCTCCATTGGCTTCGAGGACGCCGGC GGCGAGCGCGGCGACGAATTCAAGTATTCCGATCTGATCGCCGAGCACTACCAGACGCGCCACCACCAACTGCGCATCCAGGAGAAGGAAATTCTCGAAC GCCTCCCTGCCGCTTTCCAGGCGATGAGCGAGCCCATGGTCAGCCATGACTGCATCGCCTTTTACCTGCTGTCGCGCGAAGTCTCCAAGCATTGCAAGGT GGTGCAGAGCGGCCAGGGCGCGGATGAGCTGTTTGCTGGCTACCACTGGTATCCGCAGGTCGACGGCGCGCAGGACCCGGCCGCAGCCTATCTGACGGCA TTCCGTGATCGCAGTTACGAGGAATACGCCGAAACCATGCAGGATAAGTGGCTTAAGGGCGACTTCTCCGGCGATTTCGTGCGGCAGCACTTCGCACAGC CGGGAGCCGACGCCGCGGTCGACAAAGCCCTACGGATCGATAGCACCGTGATGCTGGTGGACGACCCGGTCAAACGCGTCGACAACATGACCATGGCTTG GGGCCTGGAGGCGCGGGTGCCGTTCCTCGATCACAACGTGGCCGAGCTGTCGGCGCGCATTCCCGCCAAGTACAAACTGCCCGATGGCGGCAAATACGTG CTCAAAGAGGCGGCGCGCAAGGTGATCCCAGCCGCTGTGATCGATCGTCCGAAGGGTTATTTCCCGGTGCCCGGACTCAAGCATCTGCAGGGTGAAACCC TGAACTGGGTGCGCGAACTGTTGACCGATCCGAGTCAGGATCGTGGCCTGTACAACCCGGCGATGCTCGAGAAGCTGTTCAGTGACCCCGAGGGCCAGTT GACCCCGCTGCGCGGGTCGAAACTGTGGCAACTGGCGGCAGTCAACCTATGGTTGACCGAGCAAGGCCTATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AACCCCGATCGTGACGGCGCGCGTCGTGTGCAGGCATTTACTGTTTCGCCTGCGATTTGCGGCGTCATGGCAGCTCCAAGGAAAGCACCATGCAGAAGTC TCAAGCTTATGGACAGCGGTTGTTGCGCGGCCAGACCCCGACCTACGAACGGCTGCAAGCGCGCCTTGCCGAGGACGGCCAGGAAGAGTCTCAGGGCCCG GTGACACTCCATTGTGGCTGGGGCCGGATACTGGTCGGGCATACCTATTCCGACCCCGCCGACCTGGCTGCGGACCTGTTGGGAGAGCAGGCCGGCGAAC GCGACATCGCGCTCTATGTCGCCGCCCCTCACCAGGTGCTCGCCAACGCCCCGCAACAACTGTTTCTCGACCCCTCAGATACCATGCGGATCTGGTTTAC CGACTACCGTCCCGCACGCCGCAGCTTCCGTGGCTTCGGCATCCGCCGGGCGCAAAGCGACGCTGATTGGAAGGCGATCAACTGCCTGTATCAATCGCGC
|
|
| Amino Acid Sequence |
>asparagine synthase
MCGIAGELRFDNQPADLAAVERITQHLTSRGPDACGFNSQGPVALGHRRLKIMDLCEASGQPMIDSALGLSMVFNGAIYNYPELRAELEALGYSFFSEGD TEVLLKGFHAWGDALLPRLNGMFAFAIWQRDRQELFIARDRLGIKPLYLSKTGDRLRFASALPALLKGGDIAGVLNPVALNHYMSFHAVVPAPDTLIAGI EKLPPGTFMRVDASGKTSQHRWWTLEFGARDDEQNYSFEDWQERTLATLRQSVALRQRAAVDVGVLLSGGVDSSLLVGLLREAGAADNLLTFSIGFEDAG GERGDEFKYSDLIAEHYQTRHHQLRIQEKEILERLPAAFQAMSEPMVSHDCIAFYLLSREVSKHCKVVQSGQGADELFAGYHWYPQVDGAQDPAAAYLTA FRDRSYEEYAETMQDKWLKGDFSGDFVRQHFAQPGADAAVDKALRIDSTVMLVDDPVKRVDNMTMAWGLEARVPFLDHNVAELSARIPAKYKLPDGGKYV LKEAARKVIPAAVIDRPKGYFPVPGLKHLQGETLNWVRELLTDPSQDRGLYNPAMLEKLFSDPEGQLTPLRGSKLWQLAAVNLWLTEQGL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|