Pseudomonas stutzeri 28a24, CH92_RS07565
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain 28a24, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTCGGCCTGATGCAGCCGTGGCGATTCATCCGCATTACCCGGCCCGACCTGCGCACGGCCATTGCCGAGCGGGTCGAGCAGGAGCGTGTATTGACAGCCG AGGCATTGGGCGAGCGCGGTAGCGCGTTCATGCAACTGAAAGTCGAAGGGATTCAAGCCTGCGCCGAATTGCTGGTGGTCGCGCTGATGGATGGTCGGGA CGCCCACGTGTTCGGCCGTCGCACGTTGCCGGAAATGGATCTCGCCTCGGCCGCCTGCGCGATTCAGAACCTGTGGCTCGCCTCGCGCGCCGAAGGTCTG GGGATGGGTTGGGTATCGCTGTTCGAGCCGCAAGCACTGGCGACACTCCTGCAAATGCCCGCAGGTGCAAAACCGGTCGCTGTGATCTGCCTGGGGCCGG TGGCGAAGTTCTATCCGGCGCCGATGCTGGCGCTGGAAGGCTGGGCCCAGCCGCGACCGCTGGATGAGTTGTTGTTCCACAACGGCTGGGGAACCACTGA
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| DNA Sequence for Gene |
>CH92_RS07565
GTGAGCGTGGCCCTGAGTTGCCTGGCTGGCGTTGGCCTGGATGGGATGTTCGGCGAGGCTCGTCGAGGCCATCCATTGGTGGCCTTCGGGCGATTGGCGG ACCGTCTGGAACAGCACTTCAACGGTCCCGACGGACGCGGCTGGCGTAGTCATGGCGTCACGGCCTGGTGTCTGGCCGTAGTACCGCTCACAGTAGCCGC CTGGTTGCTGAGCTTGCTGCCAGGGATCGGCTGGCTGGTCGAAGTCATCCTGCTGTATGTCGCGCTGGGTCTGCGCAGCCTGGGTGAGCACCTGATTCCA GTCGCGCTCGCCCTGCGCAAGTACGACCTCACCGAAGCACGTCGGCGAGTAGGCTTCATCGTCAGTCGTGACACTCGTGACCTGGACGCGCACGGCGTGG CCCGCGCCGCGACCGAGTCGGCGCTGGAAAATGGCAGCGACGCGGTATTCGCCGCGCTGTTCTGGTTCGCCATCGCCGGTGCCCCGGGCGTCGTGTTGTA CCGCCTGAGCAACACCCTGGATGCGATGTGGGGCTACCGCAATGCGCGATTCGAGCGCTTCGGCTGGGCGGCCGCGCGGATCGACGATGCACTGAATTTC GTTCCCGCCCGTTTGGTGGCTCTGACTTACGCGCTGCTTGGCCGCACGCGCCTCGCCCTTCGCTGCTGGTGGCGCCAGGCGCCGCTTTGGGACAGCCCCA ACGCCGGTCCGGTCATGGCCGCTGGTGCGGGCGCTTTGGGCGTCACGCTGGGCGGGCCGGCGATCTATCATGGCGCGCTGCACGAGCGGCCCACGCTCGG TGAGGGTGAAGTACCCGGCGCGCGCGATATCGAGCGTGCCCTGGATATGGTCTGGGCCGGCGTGGGCGTCTGGCTGCTGATGCTTTTTTTTCTGGGAGGT TGGCTGGATGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCATGGTGGCCGTCTACGTGCGGCAGCGCGTGACTTCGGCGTCCCGCTGTCGGATTGGCTCGATCTGTCCACTGGAATTGCACCCTATGGCTTCGATTTA CCCACCATTCCGGCGGACGCCTGGATGCGTCTGCCCGAAGCCGACGACGTGCTGGAAGTTGCTGCGCGTGATTATTACCGCGCCGAATCGCTGTTGCCGG TCGCTGGATCCCAGGCGGCGATCCAGATCTTGCCGCAGCTGCGTCGCCAGCTGCAGGTCGGGATCATTTCGCCCTGCTATGGCGAGTACGCCGAGGCTTG GCGCCGTGGTGGGCACCGTCTGATCGAATTTAGCGAAGGCGGCGTACCGCGCGCGCTCGATCAGCTCGATGTGCTAGTAGTGGTCAACCCGAATAATCCG ACCGGACGGCTGTTGCCACCCGCGCAACTGCTCGACTGGCATGCACATCTGGCTGCGCGCGGGGGCTGGCTGATCGTCGACGAAGCATTCATCGACCCGA
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| Amino Acid Sequence |
>cobalamin biosynthesis protein CobD
MSVALSCLAGVGLDGMFGEARRGHPLVAFGRLADRLEQHFNGPDGRGWRSHGVTAWCLAVVPLTVAAWLLSLLPGIGWLVEVILLYVALGLRSLGEHLIP VALALRKYDLTEARRRVGFIVSRDTRDLDAHGVARAATESALENGSDAVFAALFWFAIAGAPGVVLYRLSNTLDAMWGYRNARFERFGWAAARIDDALNF VPARLVALTYALLGRTRLALRCWWRQAPLWDSPNAGPVMAAGAGALGVTLGGPAIYHGALHERPTLGEGEVPGARDIERALDMVWAGVGVWLLMLFFLGG WLDA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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