Strain | Pseudomonas stutzeri strain 28a24, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GCTGATGCGGGTGATCGACATGCTGGCGCTGGCCTCCGCGCCCGTGGCGCTGTTCGTGATCGGAGCCAGTCTCTACGGTATGAAAGTCAGTGGCCTGGGA ATGGACGTGGGGCAGATGGCGATTGGCAAGCTGATCGTCCATCCGCTGATGATTCTGCTGTGTTTCGCCGTGATCCCGGTGTCCGATCCGGTGCTGGCCT CGGCGGGTGTGCTGATGGCCGCAGCGCCAATGATGAGCATCTATCCGATCCTCGGGGCGCGTTACGGATTGGAAGGGCGTTGTGCCGCGGCACTGGTGGC GGCAACCATCGTTTCGTTCCTGAGCATCAGTTTTTTCCTGTGGGCGATGACCTGACGGATGCAGCGAAAACCGTTCGATAACCGCGCCATGGCTCGCTTT ATCGATTCACGCGCTTAGGGGCGGGCGTTAACTTGATCGACCAGCAGCGGCGTGCGAAACGTCGATGTTGGAAACCATTTCTAGAGCAGGAGCACAGGTT
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DNA Sequence for Gene |
>CH92_RS07285
TTGAATCGGCCCAGCAATCAACTCTTCGATGCCTATTTCACCGGTGCCGAAATGCGTGCGGTGTTTTCCGACGATGGTCGGCTGCAGGGCATGCTCGATT TCGAGGCCGCACTGGCCCGCGCCGAGGCGCGTTGCGGGGTGATCCCGCCAACGGCGGTCGGCCCCATCGAGGCGGCTTGCAAGGCCGAACTCTATGATCC GGCTGCCCTGGCTCAGGCGATCGCCATCGCCGGCAATTCGGCCATCCCTCTGGTCAAGGCACTGGGCAAGCGCATCGCGCAAGACGACGCCGAGGCGGAG AAGTATGTGCACTTCGGCGCCACCAGCCAGGATGCGATGGACACCGGCCTGGTCTTGCAGCTGCGTCAGGCCATCAGCCTGCTGGAGCAGGATCTGGCGA GCCTGGGCGCGACGCTGGCGCAGCAGGCCGAACGTCACGCCGATACGCCCATGGCCGGTCGCACCTGGCTGCAGCACGCGACACCGGTGACCCTGGGAAT GAAGATTGCCGGCTGGCTGGGCGCGGTGACGCGCCATCGCGAGCGACTGCAGGCAATCAAGCCGCGGTTGCTCAGCCTGCAGTTCGGCGGCGCCTCCGGT TCGCTGGCGGCGCTGGGTGAGCAGGGCTGGCCGGTGTCTCAGGCGCTGGCAGACGAGCTGCAGCTGACGCTGCCCGAACAGCCCTGGCATACCCAGCGCG ATCGGTTGGTGGAGTTCGCCGCACTGCTGGGCATGATCGCCGGCAGTCTCGGCAAGCTCGGGCGGGACCTGTCGCTGCTGATGCAGACCGATGTCGGCGA GGTGTTCGAGCCGTCCGCGCCGGGCAAGGGCGGCTCATCGACCATGCCGCACAAACGCAACCCGGTCGGCAGTGCGGTCATGATCAGCGCAGCCACCCGC GCGCCCGGACTGGTCGCCACCTTGCTCAGCGCCATGCCGCAGGAGCATGAGCGCAGCCTGGGTCTCTGGCACGCCGAGTGGGAAACCCTGCCGGAGCTGT GCTGCCTGGTGTCCGGGTCGCTGCAGCAGGCGTTGACCGCGCTGGCCGAGCTGGAAGTCGACAGCGAGCGTATGCGCGGCAATCTCGAACAGACCCGCGG ACTGCTGCTCGCCGAAGCCGTGAGCATCGCCCTGGCGCAGCGTATTGGCCGCGACGCCGCACATCATCTGGTCGAACAGTGCTGCAAGCGCGCCGTGGCC GAAGGTCGTCACTTGCGCGGGGTACTGGGCGAGACCGCAGCGGTGCGCAACGAGCTGAACGACGCCGAGCTCGATCGTCTGCTCGATCCGGCCTGCTACC TGGGACAGGCGCGGCGTTGGGTCGAGCGCGCCGTGGCCGAGCACCAGGCGATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTTTTTGCTTCTATCCGCGGCTGCGTGCATGCAGCGCTGATCAACCACCCACACGGGAATGAAATACGATGGATGAGAAAGAACGCTACGAAGCCGGCAT GCAAGTGCGCCGCGCGGTGCTGGGCGATGCTCACGTGGACCGCAGCCTGAAAAACGTCACGCCGTTCAACGAAGAGTTCCAGGAGATGATCACCCGTCAT GCCTGGGGCGATATCTGGACGCGTCCCGGTTTGCCGCGGCATACCCGCAGCCTGGTGACCATCGCCATGCTGATCGGGATGAATCGCGAAGGGGAGCTGA AGCTGCACCTGCGGGCGGCGAAGAACAACGGCGTGACCCGCGACGAGATCAAGGAGGTTCTGCTGCAAAGCGCCATCTACTGCGGCATTCCTGCCGCCAA CGCGACCTTCCATCTCGCCGAGGAAGTCTACGACGAGTTGGGCGTGGAGTCGTTGCAGGAGCGATAGCCGATCCGACCCAAGCCACGGCGTGCCGAGAGG
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Amino Acid Sequence |
>3-carboxy-cis,cis-muconate cycloisomerase
MNRPSNQLFDAYFTGAEMRAVFSDDGRLQGMLDFEAALARAEARCGVIPPTAVGPIEAACKAELYDPAALAQAIAIAGNSAIPLVKALGKRIAQDDAEAE KYVHFGATSQDAMDTGLVLQLRQAISLLEQDLASLGATLAQQAERHADTPMAGRTWLQHATPVTLGMKIAGWLGAVTRHRERLQAIKPRLLSLQFGGASG SLAALGEQGWPVSQALADELQLTLPEQPWHTQRDRLVEFAALLGMIAGSLGKLGRDLSLLMQTDVGEVFEPSAPGKGGSSTMPHKRNPVGSAVMISAATR APGLVATLLSAMPQEHERSLGLWHAEWETLPELCCLVSGSLQQALTALAELEVDSERMRGNLEQTRGLLLAEAVSIALAQRIGRDAAHHLVEQCCKRAVA EGRHLRGVLGETAAVRNELNDAELDRLLDPACYLGQARRWVERAVAEHQAI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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