Pseudomonas stutzeri 28a24, CH92_RS05430

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004252 serine-type endopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00834
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00834
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:2.30.42.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pstt02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pstt01503 Cationic antimicrobial peptide (CAMP) resistance 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00228 pdz_new IPR001478 PDZ domain 378 457 2.6E-10
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 197 214 1.6E-52
SUPERFAMILY SSF50156 PDZ domain-like IPR036034 PDZ superfamily 223 348 1.26E-25
SUPERFAMILY SSF50156 PDZ domain-like IPR036034 PDZ superfamily 379 466 3.81E-14
Pfam PF13180 PDZ domain IPR001478 PDZ domain 380 460 1.1E-9
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 219 236 1.6E-52
Gene3D G3DSA:2.40.10.120 - - - 27 258 2.5E-83
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 102 114 1.6E-52
SMART SM00228 pdz_new IPR001478 PDZ domain 265 347 1.8E-13
NCBIfam TIGR02037 JCVI: Do family serine endopeptidase IPR011782 Peptidase S1C, Do 28 464 0.0
FunFam G3DSA:2.40.10.120:FF:000007 Periplasmic serine endoprotease DegP-like - - 28 258 4.5E-96
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 123 143 1.6E-52
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 305 317 1.6E-52
Pfam PF02163 Peptidase family M50 IPR008915 Peptidase M50 234 382 2.0E-8
Gene3D G3DSA:2.30.42.10 - IPR036034 PDZ superfamily 375 468 3.4E-18
Pfam PF13365 Trypsin-like peptidase domain - - 93 226 1.9E-34
PANTHER PTHR22939 SERINE PROTEASE FAMILY S1C HTRA-RELATED - - 27 354 1.5E-96
CDD cd00987 PDZ_serine_protease - - 265 349 7.59067E-22
SUPERFAMILY SSF50494 Trypsin-like serine proteases IPR009003 Peptidase S1, PA clan 26 256 1.84E-69
CDD cd00987 PDZ_serine_protease - - 379 464 9.67667E-18
Gene3D G3DSA:2.30.42.10 - IPR036034 PDZ superfamily 263 364 2.2E-25
Pfam PF13180 PDZ domain IPR001478 PDZ domain 268 355 5.7E-14
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 163 187 1.6E-52

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.