Pseudomonas stutzeri 28a24, CH92_RS02985

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri strain 28a24, complete genome. [Details]
DNA Sequence Upstream of Gene
CTGCTCAAGCAAAGCGTCGGCGGATTGCAGCAGACACTGCGCACCCGTGGCGAACTGAAAAACGAGATGCGCCTGTCGCTTACTACCGTACAGAGCGCCG GCAACAACCCCCTCAAGCACAGTATCGACAGTGGCGAAGCGCTGAAGCTATTGCTACGCGGCGGCAAAGCGGGTCAGCTGCCAGCCGAGCAGGCCGTGGG GCGCGCCTATCGCGACTTGCAGGCACACCAGGTGGCAATGTTGGCCGCCAGCCGCGTCGCCATCAAAAGCATGCTCGAGCAATTCTCCCCAGACCAGTTG GCATTGCGCTTCGAGCGTGACAACAAGCCACTGATTTCCACCGCAGGAAATCGCTGGCGCGCCTACAAGCGCCTGCACCTGGCCATGCAGCGCGATGAAG ATTGGAGCGAACGGCTATTCGCCCGCGATTTCGCCCAGACGTACGAGGAACAGGTACGCCTGATCGCCACGCTCAACACCGACCTTCAAGGATGATGCTC
DNA Sequence for Gene
>CH92_RS02985
ATGTCTCGCTTTCTCCCCGCCGCGCTGATCGCGGCGCTGGCTCTGCTCGGCGGATGTTCGGCGTTCTCGCCCAACTCCGATCTGACCAAGCTGGACCTGT CGCTACAAGGTAGCGACAGACTCAACCCCGACCTCAACGGCCGCCCCTCGCCCATCGTGATCCGGCTAATCGAGCTCAAGCACCCCGTAGCCTTCGAGAA CGCCGATTTCTTCTCGCTCTACCAACGCCCCAAGGAGTCCCTGTCCCCTGACCTGGTAATTCAGGAAGAGATGGAACTGCGTCCAGGCGAGCAGCGTGAC CTGAAGCTGTTCGTTCAGGAAGGCAGCCGCTACGTCGGCGTGCTGGCCGCCTACCGAGACTTGCCCGAATCCAATTGGCGTTTCGTTATTCCCCTGGAGC ACAAGGCGCAGAACCGCATCGAGCTGGGTCTCGACGAGCACGGCATTCAAGCCATCGATCCGCTCGCAAAGAGGAATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGATGAGCATGAACAAAGTGATCTGGCAGGAGGGCATGCTGCTACGTCCGCAGCACTTCCAGCAGAGCGACCGCTATTACGACGCGCAGCTCAAGCTGC GGACCCAAAAATTGGGCCACTACGCTTGGGGTTTTTTTGGGCTGGAGATTGACCGCCAGTTCCTCAACATGGGCAAGCTGGTACTTAGTCAGGCCAGCGG TCTGCTTCCTGATGGCAGCCTGTTCGAGATCGGCACCGAGCGTGATCCACTGGCGCTGGACGTACCGCCCAACACCGGCAACACCCCGGTGTACCTGGCG CTGCCATTGGTAACCGGTAACCACATCGAAAGCCGACGCCCGGAGCAAAAGGATGTGTTGGCGCGCTACACCGCATTCGATGAAGATGTCACCGATTCCA ACGCAGGCGACAGCAGCAGCAGCCAGGTGAGCACCGGCCGGCCGGACTTTCGGCTGTTGCTGGGTGAGCAGCAGAGCGATCAGGCCTATGTGAAGCTCAA
Amino Acid Sequence
>type VI secretion protein
MSRFLPAALIAALALLGGCSAFSPNSDLTKLDLSLQGSDRLNPDLNGRPSPIVIRLIELKHPVAFENADFFSLYQRPKESLSPDLVIQEEMELRPGEQRD LKLFVQEGSRYVGVLAAYRDLPESNWRFVIPLEHKAQNRIELGLDEHGIQAIDPLAKRN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site