Pseudomonas stutzeri 28a24, CH92_RS02955

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pstt03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:2.30.110.50	-	-	-	19	331	5.1E-89
Gene3D	G3DSA:1.10.101.10	-	IPR036366	PGBD superfamily	762	818	1.6E-6
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	191	388	1.36E-41
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	10	185	1.13E-56
NCBIfam	TIGR01646	JCVI: type VI secretion system tip protein VgrG	IPR006533	Type VI secretion system, RhsGE-associated Vgr protein	22	528	1.5E-121
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	260	274	-
SUPERFAMILY	SSF47090	PGBD-like	IPR036365	PGBD-like superfamily	767	813	5.23E-7
Pfam	PF04717	Type VI secretion system/phage-baseplate injector OB domain	IPR006531	Gp5/Type VI secretion system Vgr protein, OB-fold domain	410	477	7.6E-13
NCBIfam	TIGR03361	JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain	IPR017847	Type VI secretion system, RhsGE-associated Vgr family subset	10	546	0.0
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	339	358	-
SUPERFAMILY	SSF69349	Phage fibre proteins	-	-	466	647	4.32E-42
Gene3D	G3DSA:2.40.50.230	-	IPR037026	Vgr protein, OB-fold domain superfamily	379	480	2.9E-41
Pfam	PF01471	Putative peptidoglycan binding domain	IPR002477	Peptidoglycan binding-like	769	809	2.4E-5
Gene3D	G3DSA:3.55.50.10	-	-	-	95	189	5.1E-89
Pfam	PF05954	Phage tail baseplate hub (GPD)	-	-	30	329	7.2E-81
Gene3D	G3DSA:4.10.220.110	-	-	-	222	286	5.1E-89
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	241	274	-
SUPERFAMILY	SSF69255	gp5 N-terminal domain-like	-	-	388	476	1.46E-32
PANTHER	PTHR32305	-	-	-	69	615	2.0E-80

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.