Pseudomonas stutzeri 28a24, CH92_RS02145
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain 28a24, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCGCGCCCTTCGCCGCCGCGCAGCAGGCTGCTGACGCGCTCCTTCATCTCGCGGGCGGCCTTGTTGGTGAAAGTCACGGCGACGATGTATTGCGCGCG GATACCGCACTGCTGGATCAGGTAGGCGATCTTGCGGGTGATCACGCTGGTCTTGCCGGAGCCGGCACCGGCGAGCACCAGCATGGGGCCGCCGACGTAG TTCACGGCTTCCTGCTGCCGGGGGTTGAGTCGGGACATTCTCGTTCGGTCTGTTGAAGCGGGGGCGAGAGTTTAGCAGGGCATGCCTCGCGAGATGACGT TGTCCGGGCGTAGCACCTACCAGTCGTCGCCCGCCGCACTCGGTTATGGGCCGGAATGCTCTAGTCTATGCGCGTCGTGACCGCCTTAGGCTGTTCAGTC ACCGCTCCGTTTCGCACAAGGAGGTGTGCCGTCGAGGTGGCTAATCATCCTCTTGCTCTGCATGAACCGGGGATACACCGTGACAGCGCCCATCCAACCC
|
|
| DNA Sequence for Gene |
>CH92_RS02145
ATGCGTCTGGTTCTGCTGGCTGACGAGCCCGAGTGGGGCGAACGCCTGCACACTGCGCTGGTTGCTTTGCGCAGCCGACACCTGCTGCTGGTCGCTGACG ACTGGCCCACCGCCGCTGCGCATCCGGCCGAGGCGGGCCACGTTGTGCTGCTCACCACGCCACGCCGCCGTCCGGCTTCGGGCCGGTTCCCCGGGGTCAC CATTCTCTTGCTCGATGAAGAGCCGGACGAGACGCCCGAAGGTGTCGTCGACTGGCTGGTCGGTTCGCAGTTCAGCGCCGATGTGTTGCGCCGCAGCCTG CGCTATGCACGTGAACGGTGCGCGCTGCATGCTGCCCTGCAGCGCCTGGCCGAGCAGGATCCGCTGACAGGCATCGTCAACCGGCAGGGTTTTCAAGCGC TGCTTGCGGGAGAACTGGCTGAGCATGACGGTGAGGGGTTGGCTCTGGGGCTTCTGGATCTGGACAATTTTCGCCGGGTCAACGATACGCTGGGGCATCA GGCTGGTGACGGGCTGATCCTGCAAGTGGTGGCGCGATTGAAGGCGCAGCTGGAAGTCGGTGATCGGATTGCCCGGCTGGGTGGTGACGAGTTCGGCCTG CTGCTCGATACCGGACGCCATGCCGGACGCGCCGAGCAGCTAGCCGATCGAGTGGTGGAAGCCCTGGCCGAGCCTTACTGGCTCGATGGCGAAAGTCTGA TGCTCGGCTGCAGCCTTGGGCTGGCCCATGCCAAGGCCGACACCGATGCCGATCAGCTGTTGTGGATGGCGCAGGTTGCCATGCGTCATGCCAAGGCGAG GCAAGGGTGCACTTGGTATCTCTACAACGAGCGGATCAACCGCAGCGCCAGCAGCTTGGCCGATCTGGAGGGTGAGCTGCGCCGTGCGCTACGTCGAGAT GACTTGGAGCTGCATTATCAGCCGCGGTTGTGCACGGAGACCGGCCGCATCGTCGGGCTGGAAGCGCTCGTGCGCTGGCCGCATGCCTCGCGCGGCCTGC TGGCGCCAGATGAGTTCATCCCCATGGCGGAGGAGAGCGGGCTGATCGTGCCGCTGGGCTATTGGGTCATTTCGCGGGCGCTTCGCGACATGCAGAGCCT GCGGGAAAAAGGCTCCGGCGAGCTGCACATGGCGGTCAACCTGTCGTTCCGGCAGTTTCAGGACAGCCAACTGCTGGTCACCCTGCAGCGGCTGATCGAA GAGCGCGGGGTGGACCCGCACTGGCTCGAATTCGAACTCACCGAAACCGCGGTGATGCGCCGCAGCGATCAGGTCAGCGGCACCATGAGTGCATTGGCGG AGCTGGGTGTGCGCTTTTCGCTGGACGACTTCGGCACCGGGTTTTCGTCGTTCGTGCACCTGAGCCGGCTACCCATCAGCCTGTTGAAGATCGACAAGAG CTTCGTCGACGGCGTAACGGCCAAGGGGGACAACAGCCTGGTGCAAGCCATGATCGGCCTGGCTCATGACCTGGGCTTGGAAGTGGTTGCCGAAGGCGTA GAACGGATCGGTCAGCTGAAGCTACTGGAGCGCTTCGGCGCCAACCAGATTCAGGGTTATCTGATCAGCAAGCCCCTGCCACTGGCGGAACTGGAGAGCT TTCTGGCGCAAGGGCGCCAGGCCCACGCCGGCGTTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGCACCGGGCATAAGCCCGGCGCCCGGCGGCTAGCGCACCCTTTACCGCACCATGTGAAGAAAGTGCATGTGCTTCTCGTACTGGTCCAGAATGTCGCCG ATGACGCCGTCACGGCTCCAGCCCATTACGTCGTAGTTCTGTCCGCCCTCTTTGAGGTGAACCTCAGCGCGGTAATAGGTGGGCTCGTCGCCGTCGCTTT CGGTGGCGACGAAACTGGGCATTGGATAGCCGCGTGGCCGAATCTGGTAGATGAAATCGGGCGCGCCCTCGTGGGTGATCTGCAGCCCGGTACGGTTGTC CTCGTCGGAAGTCAGCTCAACGCCGTACCCCTGCTTGCGCAACTCTTCTGCTACAGCTGCACAAGCGGGGCTCGCAATTTCACTGATGAAACGCTCTACG TCATGACGGCGCGGATACTTGGTCAGGTTCTGCACTCGCCGGCGCCATCCACCCTCCTGGGGAGCTGTAGGCGTGGTGCTGATTGTTTGATAGCGCAGGC
|
|
| Amino Acid Sequence |
>diguanylate cyclase
MRLVLLADEPEWGERLHTALVALRSRHLLLVADDWPTAAAHPAEAGHVVLLTTPRRRPASGRFPGVTILLLDEEPDETPEGVVDWLVGSQFSADVLRRSL RYARERCALHAALQRLAEQDPLTGIVNRQGFQALLAGELAEHDGEGLALGLLDLDNFRRVNDTLGHQAGDGLILQVVARLKAQLEVGDRIARLGGDEFGL LLDTGRHAGRAEQLADRVVEALAEPYWLDGESLMLGCSLGLAHAKADTDADQLLWMAQVAMRHAKARQGCTWYLYNERINRSASSLADLEGELRRALRRD DLELHYQPRLCTETGRIVGLEALVRWPHASRGLLAPDEFIPMAEESGLIVPLGYWVISRALRDMQSLREKGSGELHMAVNLSFRQFQDSQLLVTLQRLIE ERGVDPHWLEFELTETAVMRRSDQVSGTMSALAELGVRFSLDDFGTGFSSFVHLSRLPISLLKIDKSFVDGVTAKGDNSLVQAMIGLAHDLGLEVVAEGV ERIGQLKLLERFGANQIQGYLISKPLPLAELESFLAQGRQAHAGV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|