Pseudomonas stutzeri 28a24, CH92_RS00040
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain 28a24, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TATTTCCAGCAAGTCGGTGGCATCGAGTGCTACCCGGTCACGGGTGAGATCACCTATGGCCTGGAGCGTCTGGCGATGTACCTGCAAGGCGTCGACTCGG TCTATGACCTGATCTGGACGGATGGTCCGTTCGGCACCGTTACCTATGGCGATGTGTTCCACCAGAACGAGGTGGAGCAATCGACCTATAACTTCGAACA CGCCAACGTCGAGAAGCTGTTCGAACTCTTCGATTTCTACGAGTCGGAAGCCAATCGGCTGATCGACCTGGAGCTGCCGCTGCCCACCTATGAAATGGTG TTGAAGGCCTCGCATACCTTCAACCTGCTGGACGCACGCCGCGCCATCTCGGTAACGGCGCGTCAGCAATACATCCTGCGCGTGCGCGCACTGGCTCGCG CGGTGGCGCAGAGCTACCTGCAGGCACGCGCGAGGCTCGGCTTCCCCATGGCGGCTCCCGACCTGCGTGACGAAGTATTGGCCAAGCTGGAGGCCGCAGA
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| DNA Sequence for Gene |
>CH92_RS00040
ATGAGTGCACTGGATTTCTTGGTCGAGCTCGGCACCGAAGAGCTGCCACCCAAGGCGTTGAGCAAGCTGTCCGAAGCTTTCCGTTCGGGTATCGAAAAAG GCTTGAAGCAAGCCGGTCTCGCGCATGGGCGCGTGCAGGCGTATGCCGCCCCGCGGCGTCTTGCCGTACTGATCGAACAGCTCGACAGTGAACAGCCGGA TCGCAGCATCAACCTCGACGGCCCGCCGTTGCAGGCCGCCTTCGACGCCGAAGGCGAGCCGACTCAGGCCGCCCTGGGCTTCGCTCGCAAGTGCGGCGTG GACCTCGCGGAAATCGACCGGAGCGGTCCGAAGCTGCGCTACAGCCGTTCGATCCCCGGCCAGGCGACCGCTGAGCTGTTGCCCGGCATCGTCGAAACCT CGCTGAACGATCTACCGATTCCTAAGCGCATGCGCTGGGCCGCGCGCAAGGAAGAGTTCGTCCGCCCAACCCAGTGGCTGGTGATGCTCTTGGGTGATCA GGTCGTCGATTGCACGATTCTGACCCAGCGCGCTGGTCGCGAATCTCGCGGTCATCGCTTCCACAGTCCGGGTCCGGTGCGCATTTCCGAGCCGACCAGC TATCTGGAAGACCTGCGCGGCGCGCGGGTGGTTGCCGACTTTGCCGAACGCCGCGAGCTGATCGCCAAGCGCGTCGAACAACTTGCTGCCGAGCAGAACG GCAGCGCCATCGTGCCGCCGGCGCTGCTGGACGAAGTCACGGCGTTGGTGGAGTGGCCGGTGCCGCTGGTGTGCGCCTTCGAGGAGCGCTTCCTGGAAGT GCCGCAGGAAGCGCTGATCACCACCATGCAAGACAACCAGAAGTACTTCTGTCTGCTGGACGCCAACGGCAAGCTGCTCCCGCGCTTCATCACCGTGGCC AATATCGAATCCAAGGATCCGGCGCAGATCGTTGCGGGCAATGAAAAGGTGGTCCGCCCTCGTTTGACCGACGCCGAGTTTTTCTTCAAACAGGACAAGA AGCAGCCTCTGGACAGCTTCAACGAGCGGTTGAAGAACGTGATCTTCCAGGCGCAGCTGGGCAGCGTATACGACAAGGCAGTGCGGGTTTCTCGGCTCGC CGCCTTCATCGCTGAGCGCACCGAGGGCAATGCCCAGTGGGCGGCGCGCGCCGGTCTGCTCTGCAAGTGCGACCTGGCTACCGAGATGGTCGGCGAGTTT CCGGAAATGCAGGGTATCGCCGGCTACTACTACGCCGCTAACGGCGGTGAGCCCAACGATGTTGCCCTGGCCTTGAACGAGCAATACATGCCGCGCGGCG CAGGTGCCGAGCTGCCAACCACCCACACCGGCGCCGTGCTGGCGGTGGCGGATAAGCTGGACACGCTGGTCGGCATCTTCGGCATCGGCATGCTCCCCAC CGGCAGCAAAGATCCGTACGCGCTTCGCCGCGCGGCACTGGGCATCCTGCGCATCTTGATCGAGAAGCAGCTGGACCTCGACGTGGTGGCTGCCGTGCAG TTCTCCATCAATCAGTTCGGCGGGCAGGTAAAGGCCGAGGGGCTGGCCGATCAAGTGCTGGAATTCATCTTCGATCGCCTGCGCGCTCGCTATGAGGATG AGGGCGTCGAGGTTGCGTCCTATCTATCGGTACGCGCCGTACAGCCACGCTCAGCGCTGGATTTTGATCAACGGGTACAGGCGGTGCAGGCGTTCCGCGA TCTGCCGGAAGCCGAAGCCTTGGCGGCGGCCAACAAGCGGGTTGGCAATCTTCTCAGCAAGTTCGAGGCGAAATTGCCGGAGACGGTCGAGCCGCGCTAC TTCGACAACGCCACCGAGTTTTCACTGTACTCCGCCCTGCAACAGGCCGAACAGGCCGTACAGCCGCTTGCCGCGAACCGCCAGTACCGTGAGGCGCTGG AACGTCTGGCGCACCTGCGAGGGCCGGTGGATGCCTTCTTCGAGGCGGTACTGGTGAACGCCGAAGACCCTTCGGTGCGCGCCAACCGCTATGCCTTGCT TGCCCGGTTGAGAGGATTGTTCCTTGGCGTTGCCGATATTTCCGCACTTGGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGGTGAAACTGATAGTGCTCGACCGCGATGGGGTCATCAATGAGGACTCTGACGCCTACGTTAAGAGTCTGGCCGAGTGGATCCCGATTCCGGGATCC ATCGAAGCCATTGCTCGATTGTGCAAGGCAGGCTGGACGGTGGCGGTCGCCACTAACCAGTCGGGGCTGGCACGAGGACTGTTCGATGCAACCACGCTCG ACAACATGCATTTCAAGCTGCAGCAGCTGGTGATGGAGCAGGGCGGGCGAATCGATCTGATCGTGCATTGCCCACATGGGCCAAACGATGGCTGCGTATG TCGCAAGCCGTTGCCCGGTTTGTTTCAGCAAATCGCTGAGCACTTTCATTTGAAAGATCTGGACGGTGTGCCGGTAGTTGGCGATAGCCATCGCGATCTG CATGCGGGGATGAGTGTCGGGGGTGTGCCTTATCTGGTTCGAACCGGTAAAGGCTTGAAAACTCTTGGAGGCACCCTGCCGACGGGAACTCAAGTGTTCG
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| Amino Acid Sequence |
>glycine-tRNA synthetase subunit beta
MSALDFLVELGTEELPPKALSKLSEAFRSGIEKGLKQAGLAHGRVQAYAAPRRLAVLIEQLDSEQPDRSINLDGPPLQAAFDAEGEPTQAALGFARKCGV DLAEIDRSGPKLRYSRSIPGQATAELLPGIVETSLNDLPIPKRMRWAARKEEFVRPTQWLVMLLGDQVVDCTILTQRAGRESRGHRFHSPGPVRISEPTS YLEDLRGARVVADFAERRELIAKRVEQLAAEQNGSAIVPPALLDEVTALVEWPVPLVCAFEERFLEVPQEALITTMQDNQKYFCLLDANGKLLPRFITVA NIESKDPAQIVAGNEKVVRPRLTDAEFFFKQDKKQPLDSFNERLKNVIFQAQLGSVYDKAVRVSRLAAFIAERTEGNAQWAARAGLLCKCDLATEMVGEF PEMQGIAGYYYAANGGEPNDVALALNEQYMPRGAGAELPTTHTGAVLAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKQLDLDVVAAVQ FSINQFGGQVKAEGLADQVLEFIFDRLRARYEDEGVEVASYLSVRAVQPRSALDFDQRVQAVQAFRDLPEAEALAAANKRVGNLLSKFEAKLPETVEPRY FDNATEFSLYSALQQAEQAVQPLAANRQYREALERLAHLRGPVDAFFEAVLVNAEDPSVRANRYALLARLRGLFLGVADISALG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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