Pseudomonas stutzeri 28a24, CH92_RS00020 (gyrB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain 28a24, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTATTCGAACGCACGTTAGCATCTCTGCTAGAGCTGGAAGGCTTTCAGTTGAGTTATTACCGCGGCTGGGATAAAGAGCGTTCCCTGGCTGAGGTGTTGG ATGCCTCGATCGAGCGCGACAGATTGATGGGACATACCCAGGCCGGGCCCCAGCGGGCCGATCTTCGCTTACGGATTGCCAACCATAGCGCGGCGGAAAT ATTGTCACGCGGCCAGCAAAAACTCGTCGTTTGCGCGCTCAGGATCGCTCAGGGTCATCTGGTCAGCGAGGCCAAGCGGGGCCAGTGTATTTACCTTGTT GATGATCTACCGTCCGAGTTGGACGATAACCACCGGCTTTCGTTATGCCGGTTGCTGGAACAGCTGAATTGCCAGGTATTCATCACTTGCGTCGATTCGA ATGTATTGCGAGAAGGCTGGCGTGACGATACTCCAGTCTCAATGTTTCACGTGGAACATGGTGAGATAACCCAAGTCCACGGCCCCTCGGGAGTGAAGGC
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| DNA Sequence for Gene |
>CH92_RS00020
|gyrB
ATGAGCGAAAACCACACGTACGACTCGTCCAGCATCAAGGTGCTAAAAGGCCTGGATGCGGTACGTAAACGTCCCGGCATGTACATAGGAGATACCGATG ATGGCACCGGCTTGCATCATATGGTCTTCGAGGTCGTCGACAACTCGATCGACGAAGCGTTGGCCGGTCATTGCAGCGATATCTGCATCACCATACATGT AGATGAATCTATCAGTGTCCGTGATAACGGCCGCGGGATCCCGGTAGATACGCACGAAGAAGGCGTATCCGCAGCCGAAGTCATCATGACGGTATTGCAT GCGGGTGGTAAGTTCGACGACAACTCTTATAAGGTATCCGGCGGCCTGCATGGCGTGGGCGTCTCGGTGGTAAATGCACTTTCGGAAGAGCTGGTACTGA CGATCCGCCGCGAGGGGAAAGTCTGGGAGCAGACCTATCGCCACGGTGTACCCCAAGCACCATTGGCTTCTGTCGGCGAGACCGAAGGGTCAGGCACCGA AATTCATTTCAAACCTTCGGCCGAAACCTTTCAGAATATTCATTTCAGCTGGGACATCCTTGCCAAGCGGTTGCGTGAACTGTCGTTCCTGAACTCTGGC GTGGGTATCGTGCTGCGCGATGAGCGCAACGCTAAAGAGGAGCTGTTCAAATACGAAGGTGGTCTTAGCGCGTTCGTAACTTATCTCAACACCAACAAGA CGCCCGTTAACGAAGTATTCCACTTCAATGTTCAACGGGATGATGGTGTCGGTGTTGAAGTGGCGCTGCAATGGAATGACAGCTTCAACGAAAACCTGTT GTGTTTCACTAATAACATTCCGCAACGCGATGGTGGTACCCACTTGGCGGGCTTTCGCTCCGCGCTGACACGTAATCTGAACAACTATATCGAGCAGGAA GGGTTGGCGAAGAAACACAAGGTTTCGACCACCGGTGATGATGCTCGTGAAGGTTTGACGGCCATCATTTCGGTGAAGGTGCCAGATCCCAAGTTCAGCT CTCAGACCAAGGACAAGCTCGTTTCGTCTGAAGTCAAGACGGCCGTCGAACAGGAAATGGGCAAGCATTTTGCCGACTTTCTACTCGAGCATCCCAATGA GGCAAAGGCCGTCGTTGGGAAAATGATCGATGCGGCCCGCGCGCGCGAAGCGGCCCGCAAGGCCCGTGAAATGACGCGACGTAAAGGCGCGCTGGACATT GCGGGTCTACCCGGCAAGCTTGCTGACTGCCAAGAAAAGGACCCTGCCCTTTCCGAGCTCTACATAGTGGAGGGTGATTCCGCGGGCGGTTCTGCCAAGC AGGGCCGTAACCGCCGGACCCAGGCCATCCTGCCGCTCAAGGGCAAGATCCTTAACGTGGAGAAGGCCCGATTCGACAAGATGATCTCTTCCCAGGAAGT AGGTACGCTGATCACCGCTCTTGGTTGTGGTATCGGTCGTGAGGAATACAACATCGACAAGTTGCGTTATCACAACATCATCATCATGACCGATGCTGAT GTTGACGGTTCGCACATCCGCACGCTGCTATTGACGTTTTTCTTCCGCCAACTTCCTGAGCTGATTGAGCGCGGTTATGTCTATATCGCTCAGCCGCCGC TATACAAGGTAAAACGCGGCAAGCAAGAGCAGTACATCAAAGACGACGAGGCGATGGATGAATATCTCACCCAGTCCGCGTTAGAGGATGCCAGTCTACA CGTCAATGAGCACGCACCAGGCCTCTCGGGCGAGGCGCTGGAGCGGCTGGTCAACGACTATCGTACTGTGATGAAGACGCTGCAGCGGCTCTCCCGCCTC TATCCACAAGAGTTGACCGAGCACTTCATCTATCTGCCGCGAGTGAGCGTCGAGCAGCTTGGTGATCACGCTGCGATGCAAGCTTGGTTGGAGCCCTATG CGGCTCTGCTGAAGGGGGTTGAGCGTTCTGGATTGGCCTACAAGGCAAGCTTGCGTGAGGATAAAGAGCGGAATCTCTGGCTGCCGGAAGTGGAAATTAT TTCTCACGGGTTGGCGAGCTACATCACCTTCAATCGCGACTTCTTTGGCAGCAACGACTACAAGACGGTTACCGTGTTGGGTGAGAAGCTGAACAGCTTG CTTGAGGAAGGCGCCTACGTTCAGCGTGGTGAGCGCAAAAAGCCGGTCACGACCTTCAAGCAGGCGCTTGACTGGTTGATGACCGAAGGAACTCGTCGCC ATAGCGTTCAGAGATATAAGGGATTGGGCGAAATGAACCCGGATCAGCTATGGGAAACCACCATGGATCCTGCGGTTCGCCGGATGCTCAAGGTCACCAT CGACGACGCTATTGCAGCGGATCAAATATTCAACACGCTCATGGGAGACGCAGTGGAACCCCGCCGAGATTTCATCGAATCCAATGCCTTGGCGGTGTCT AACCTGGACTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGTCACCGATTGAAAAACGCTTTAAAAAATCAAACCCGGCGAAAGCCGGGTTTTTTGTTCCACGTGGAACACGATAGGGCTAGTCGATCAAGGTGCTTG GTTTAATCAATTTTCACGGCTCTTCCCGGGCTCGTATGCTTTCCCCCATTCAAGCTTGCACCCTTCCTAACTCTCTGTTTTGCAGTGAGCCATCCGCTAC GGGAAATTTTATATGCTCGACAGCAACCTGAAGTCGCAACTGAAAACCTACCTGGAAAAGGTCACCCAGCCGTTCGAGATCGTCGCGTCCCTCGATGACG GTGCCAAATCCCAGGAAATGCTTAGCCTGCTGGAAGAAATCGCCAGCCTGAGCGACAAGATCACCCTGCGCGCCGATGGCAACGATGATCGTCGTCCGTC GTTCGCGCTCAACCGCATCGGCGGCGATATCAGCCTGCGCTTCGCCGGCCTTCCGATGGGGCATGAGTTCACCTCCCTGGTGCTCGCGCTGCTGCAGGTC
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| Amino Acid Sequence |
>DNA gyrase subunit B
MSENHTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCSDICITIHVDESISVRDNGRGIPVDTHEEGVSAAEVIMTVLH AGGKFDDNSYKVSGGLHGVGVSVVNALSEELVLTIRREGKVWEQTYRHGVPQAPLASVGETEGSGTEIHFKPSAETFQNIHFSWDILAKRLRELSFLNSG VGIVLRDERNAKEELFKYEGGLSAFVTYLNTNKTPVNEVFHFNVQRDDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEQE GLAKKHKVSTTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKHFADFLLEHPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDI AGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDAD VDGSHIRTLLLTFFFRQLPELIERGYVYIAQPPLYKVKRGKQEQYIKDDEAMDEYLTQSALEDASLHVNEHAPGLSGEALERLVNDYRTVMKTLQRLSRL YPQELTEHFIYLPRVSVEQLGDHAAMQAWLEPYAALLKGVERSGLAYKASLREDKERNLWLPEVEIISHGLASYITFNRDFFGSNDYKTVTVLGEKLNSL LEEGAYVQRGERKKPVTTFKQALDWLMTEGTRRHSVQRYKGLGEMNPDQLWETTMDPAVRRMLKVTIDDAIAADQIFNTLMGDAVEPRRDFIESNALAVS NLDF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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