Pseudomonas sp. StFLB209, PSCI_RS27055

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0016772	transferase activity, transferring phosphorus-containing groups	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0000155	phosphorelay sensor kinase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:cd00082	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00304	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0016310	phosphorylation	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0007165	signal transduction	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00304	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pses02020	Two-component system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
CDD	cd06225	HAMP	-	-	179	226	1.74614E-11
CDD	cd00082	HisKA	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	233	285	5.45326E-6
Gene3D	G3DSA:1.10.287.130	-	-	-	225	286	2.8E-10
SMART	SM00388	HisKA_10	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	232	291	2.6E-7
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	407	425	4.8E-8
Gene3D	G3DSA:1.10.8.500	HAMP domain in histidine kinase	-	-	176	224	2.1E-9
Pfam	PF16750	Sensor domain of 2-component histidine kinase	IPR031930	Two-component histidine kinase, sensor domain	42	147	3.6E-30
SUPERFAMILY	SSF158472	HAMP domain-like	-	-	176	230	2.35E-8
Pfam	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	IPR003594	Histidine kinase/HSP90-like ATPase	339	444	1.7E-17
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	373	387	4.8E-8
SMART	SM00387	HKATPase_4	IPR003594	Histidine kinase/HSP90-like ATPase	336	445	4.2E-25
SUPERFAMILY	SSF47384	Homodimeric domain of signal transducing histidine kinase	IPR036097	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily	215	290	2.75E-10
SUPERFAMILY	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	280	444	4.71E-31
Gene3D	G3DSA:3.30.450.170	-	IPR038428	Two-component histidine kinase, sensor domain superfamily	31	147	1.5E-30
PANTHER	PTHR45436	SENSOR HISTIDINE KINASE YKOH	-	-	2	445	5.2E-44
Gene3D	G3DSA:3.30.565.10	-	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	323	445	7.0E-30
SMART	SM00304	HAMP_11	IPR003660	HAMP domain	176	231	7.0E-13
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	391	401	4.8E-8
Pfam	PF00672	HAMP domain	IPR003660	HAMP domain	173	227	9.2E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.