Strain | Pseudomonas sp. StFLB209 DNA, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CGGCGGTGCAGCGGGTTGTCGGTCAGGTTGAGCAATTGACCGGGTACTACCTCCAGGCTCCAGATGTGCACGGCGCCTGGATAATCGCGTTGCAACTGCT CGCGTTGTTCGAACCACTGGCTGGCGGTGGTGGCTTTGAGGCGGTCGAGCATCACGGCATCACTGGCAGCTACAAAGTCCAGCGCCAGTGGGGTGTCGTT GTTGGCTCTTGGCTCGACGTCAATGCGCACGCTGTGCAATTGAACGCGTTGAGCAAAAAGGCTGCAACCGTTTATCAGAAAAACTGTCAATACGACAACC AAAACTTTGATTGTAAGGAACTTCGACAAATTCATACGAATCCAACATAGGTTTTATAAGAAATTTCTTTGCTTTCTTATAGCCTTCTTCTAATGTTTTG CCCAGCCAGCTTTCCAACGGGAGTTGCGCCTGTGTAGTCAGAATTTGTCGACAGTGTGTGCCTGGCCTCCTGTGTGGCGAGGCATCTGAAGGAGTAAGGC
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DNA Sequence for Gene |
>PSCI_RS23055
ATGGCAGCGAATCAGGAAAGCAAACAGCGTTATTTGGGGCGCAATCGTCCGCCGCGGGTCCAGATCACTTATGACGTTGAAATTGGCAACGCCTTTGAAA CAAAGGAGTTGCCTCTGGTCGTGGGGATTCTGTCCGACTTGTCAGGTAATTCAGCGCCGGCCAAGGCAGGATTGGATAAGCGGGGGTTTGTAGATATTGA TCGTGACAATTTCAATACCGTGCTGAGCAAGATTCACCCGCAAGTGAGCTTCACTGTTGAAAATGTTCTGGAAGGCCAAAGCGGTAATCTCAAAGTCGAT CTGCAATTCAACAGCATTGATGATTTCAGCCCCGAAAAACTGGTTCGTCAGGTCAATGGCTTGAAAGAACTGTTCGAAAAGCGCCAGCGCCTTCAAGACC TGCTGATCAAACTCGATGGTAACGAAGCCCTCGATCAGAGTCTGGTTTCCGGCCTCTCCAGCGACGATGCGGTCAAGCAGCTTCAGGCTCAGCTCGCGGC GGCACTGCCTGCGCCAACGCCAGCGTTACCGGTGAATACGGATACCCCAGCGGGGCAGGATGAAACGCCTGAAGATCCGAACCCGACCACCAACCCTGCC TGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCGCGCCGTCCACGGAGGATTTTTCATGCCTAAAGAGCCTGTTGCCACTACCACCGGCACCCAGACCCTGAACGACTCGTTGCTCGACCGCATTGTCGC CACCATGAGCGTGAGCGGCAGCAGCGATGACAAGACCCATGCGCACCAGATGCTGCAGGTGTTCGCTGAAGAGGTCGAAAGCCACAAGGTTCACGCCGAC ACCAACATGCTGACCACCATCAGCGAGCGTATCAAGGCGCTGGACGACCAGATTCACGCGCAGCTCAACCTGATTTTGCACGCCGAACCGTTCCAGAAGC TCGAAGCCTCCTGGCGCGGTTTGCACCAGTTGGTGAGCAACACCGAAACCGGCACTTCGCTGAAACTGCGACTGCTTAACGTCGGCAAGGAAGAGCTGGC CAACGACCTGAAAAAGGCCGTGGAATTCGATCAGAGCGTACTGTTCAAGAAGGTTTACGAAGAAGAGTACGGCACGTTCGGTGGCAGCCCGTTCAGCCTG
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Amino Acid Sequence |
>hypothetical protein
MAANQESKQRYLGRNRPPRVQITYDVEIGNAFETKELPLVVGILSDLSGNSAPAKAGLDKRGFVDIDRDNFNTVLSKIHPQVSFTVENVLEGQSGNLKVD LQFNSIDDFSPEKLVRQVNGLKELFEKRQRLQDLLIKLDGNEALDQSLVSGLSSDDAVKQLQAQLAAALPAPTPALPVNTDTPAGQDETPEDPNPTTNPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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