Pseudomonas sp. StFLB209, PSCI_RS23035

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. StFLB209 DNA, complete genome. [Details]
DNA Sequence Upstream of Gene
AGGCACCGCCGCGGCTACGTGGGACCTGGCGGCCAACAAACTGCAATCGAAGTAATCGCTCACCTGTTGCGCCATCGGCTGGAGTCCGGGTATGCGTGTT GCGTTGTTCGACCTGTTGGCCGGTGGCCAGGCGACCGATTTCGATGCGCAGGACCCGCGCCGGATCGGCGAGTCAGTGCGCCGGGAGCTTGAGCGTCTGC TCAATACCCGGCGCACTGAGCGCCATCATGGCATGGCCGCCAGTGTCATCGATTACGGCATCGGTGACTGGAGTGCGCTGTACGCCGACCGTGAGCAGGA CCAGCGACTGCTCAGCCGTGAAATACGCAAAGCCATCAATCATTTCGAACCGCGCCTGGAGCTTGCGAGCGTGGAAATCAGTGGCGTGCCCGGCCAGCGC ACGCGCATGACCATTCGTGTGATCGGTCATATTCGCGGTCTTCAGGAGGCCAGTATGGCTTTTGTAATGAATCTGGGTGAGGGCGGCTTCGAGGTCAGGC
DNA Sequence for Gene
>PSCI_RS23035
ATGAGCGATTCGATTGATGCCGAACTGCTGGACTACTACCAGCGGGAATTGACCTGGCTACACCGTGCCGGGGCAGATTTCGCGGCCAGCCATCCAACAC TGGCCGGGCACTTGAAGTTGTCTGCGGCCGGCTCCCAGGACCCTCATGTAGAACGCCTGCTGGAAAGTTTCGCGCTATTGACGGCACGTCTGCAGCGGCG CCTGGACGATGGTTATGCCGAGTTCAGCGACGCCTTGCTCGAACAGCTCTACCCCTTGGCCTTACGTCCGATGCCGTCGTGTGCCATCGCCCGTTTCGTG CCCGACACCTCCAAGGGCAATATTGCCGACGGCTACCTGTTACCCCGCGCAACGTCGGTGTTCAAGGCCCCGGACAAGTCTCAGCCTGACAGTCTGTACT TCCGTACCGGTTTTGACCTGACACTGTGGCCGGTAAGGGTTGAAGAGGTGACACTGCTCGATACCGACCGAAGCCAGAGTGAAACGGCGATCAATCGCGC CAGCTCGTCACTGTGCCTGCAACTGTCGTGCAGTGGCGAGAAGAACTGGGCGCAGCTGCCTGACAGCCTGACCCACTTGCGCATTCACCTGGCAGGCTCG CCGATCAATCGGGCCTTGCTTTACGATTTGCTGGCCGCGCATAGCCTTGATGTTGTGTGCGCCGTGCCAGGCGGCACCCCGCAGGCGGTCAATGCCTTAC CCGCTGCGGTTGGCTTCGCTGAACAACAAAGCCTGTTGCCTGACGAAGACGGTGTCCATCCGGCATTGCGGCTGTTGGTGGAGTACTTCACCTTCCCGGA AAAATTCGCTTTTTTCGATATCCCGCTACGTATTCCGGCCCAGGCCACTGATCGTTTGCTGGTCTACATCGCGTTCGATACGCTGCCGAGCCAGCGGGTC AGCCTGCAACGCGAAGACATCGCACTGGGGTGTGCGCCAATCATCAACCTGTTTCCTCGCACCGCCGAAACCCTGCGGCCCGATGGCACACGCAGTGAGC ACTTGCTGGTTGCCGATTCGCACCGCGACAGCAGCACAGAGATTCACAGTATTCGCAGCCTGGTATCCAGCCACAATGGCGTAATCCAGCCGGTTGCGCC GTTCTATGGTGACCAGCATGGCGTCGGCGACCGAGCGCTGTTCTGGCATGCGCGACGCATCAGCGGCCTGAAAGCCGGGCGTCCCGGTACTGACCTGATG CTCAGTCTGGTCGACAGCGAGTTTCAGCCGAGCCAAGAGCAGCCCGGACGCCATTTCACCGCCAAGGTACTGTGCACCAATCGGCATCTGGCTGAGCGCC TGGCGCCCAATAGCGTGCTCAAATTCGAAAGCAGCGGCCCAGTGGCACAGATTCACCTGCTTAAAAGCCCGACCCGGCAATCAATGCCCAATCTGGCCGG CGCCTCGCGCTGGCGGCTGGTGTCGCAGCTCAACCTTAACCATACCTCGCTGGTCGAAGGCCCCAAGGCACTGGCATCGCTCAAGGAAATGCTCGTGCTG CACAATCTGCGCGAGGACTCTGCGGTACGTCAGCAGATCGACTGCATTGTCGGCATGCGCACTGAACGGGTGGTTGATCGGGTCGGCCAGGATGCCTGGC GTGGCTGGCGTAACGGCCTCGAAGTACGCCTGACTCTCGATTCCAAGGGCGCGGCGGGGCATAGCCGGGTACTGTTTTGCGCGGTACTGGCGAATTTCTT CGCCTTGTATGCCACCACCAACTGCTTCGTGCGTACGGTGCTGGTCGAAGGTGACAAGGAGATCATGAGATGGCAACCCGAGAGCATCGCGGGCCTGGCA CTTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGCACGTCTGCGCTGGGCGCCGCAGCGTTTCGAATGGTTGCAGGCGCTGCAGATTCTCGAGCGTGAGCAGCCGCACTTGCCGGCACTGGGCTGCAGCAA TGATCCGCAGCAGGAAGCCGTGCGCCTGCGTGGTCCTTTGTTGCCGGTGTTTTCACCCAGTCAGATCAGCAGCCTGCAGCTTGCCCCACAGGCGTTTGCG CCTTTGTCAGCGCTGCGCCCGCCATTGGTATACCGCCATTTGCACCGCAAGCCGCTGGTCGTGCCACGGCTGACCTTGCATACCCCGGTTTTTGGCCTCG GTGGCCCTGATGGCCCGCTGCCTTACGCCTATCAGGAATGGTTGCAACAACGAGTCCGTGCCGGGGATCGGGGCACGCTGGCGTTTCTCGACCTGTTTCA GCACCGCTTGCTGAGCCTGCTATACAGAGTCCAGCTTAAACACCGGATTGCTTTGCCTTATCAGCGCAGCGAACACAGCCCGGTTTACCAGCAGTTGCAA
Amino Acid Sequence
>type VI secretion system protein ImpG
MSDSIDAELLDYYQRELTWLHRAGADFAASHPTLAGHLKLSAAGSQDPHVERLLESFALLTARLQRRLDDGYAEFSDALLEQLYPLALRPMPSCAIARFV PDTSKGNIADGYLLPRATSVFKAPDKSQPDSLYFRTGFDLTLWPVRVEEVTLLDTDRSQSETAINRASSSLCLQLSCSGEKNWAQLPDSLTHLRIHLAGS PINRALLYDLLAAHSLDVVCAVPGGTPQAVNALPAAVGFAEQQSLLPDEDGVHPALRLLVEYFTFPEKFAFFDIPLRIPAQATDRLLVYIAFDTLPSQRV SLQREDIALGCAPIINLFPRTAETLRPDGTRSEHLLVADSHRDSSTEIHSIRSLVSSHNGVIQPVAPFYGDQHGVGDRALFWHARRISGLKAGRPGTDLM LSLVDSEFQPSQEQPGRHFTAKVLCTNRHLAERLAPNSVLKFESSGPVAQIHLLKSPTRQSMPNLAGASRWRLVSQLNLNHTSLVEGPKALASLKEMLVL HNLREDSAVRQQIDCIVGMRTERVVDRVGQDAWRGWRNGLEVRLTLDSKGAAGHSRVLFCAVLANFFALYATTNCFVRTVLVEGDKEIMRWQPESIAGLA L
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site