Strain | Pseudomonas sp. StFLB209 DNA, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CTGTGCACCAATCGGCATCTGGCTGAGCGCCTGGCGCCCAATAGCGTGCTCAAATTCGAAAGCAGCGGCCCAGTGGCACAGATTCACCTGCTTAAAAGCC CGACCCGGCAATCAATGCCCAATCTGGCCGGCGCCTCGCGCTGGCGGCTGGTGTCGCAGCTCAACCTTAACCATACCTCGCTGGTCGAAGGCCCCAAGGC ACTGGCATCGCTCAAGGAAATGCTCGTGCTGCACAATCTGCGCGAGGACTCTGCGGTACGTCAGCAGATCGACTGCATTGTCGGCATGCGCACTGAACGG GTGGTTGATCGGGTCGGCCAGGATGCCTGGCGTGGCTGGCGTAACGGCCTCGAAGTACGCCTGACTCTCGATTCCAAGGGCGCGGCGGGGCATAGCCGGG TACTGTTTTGCGCGGTACTGGCGAATTTCTTCGCCTTGTATGCCACCACCAACTGCTTCGTGCGTACGGTGCTGGTCGAAGGTGACAAGGAGATCATGAG
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DNA Sequence for Gene |
>PSCI_RS23030
ATGGCAACCCGAGAGCATCGCGGGCCTGGCACTTTAAGCGCACGTCTGCGCTGGGCGCCGCAGCGTTTCGAATGGTTGCAGGCGCTGCAGATTCTCGAGC GTGAGCAGCCGCACTTGCCGGCACTGGGCTGCAGCAATGATCCGCAGCAGGAAGCCGTGCGCCTGCGTGGTCCTTTGTTGCCGGTGTTTTCACCCAGTCA GATCAGCAGCCTGCAGCTTGCCCCACAGGCGTTTGCGCCTTTGTCAGCGCTGCGCCCGCCATTGGTATACCGCCATTTGCACCGCAAGCCGCTGGTCGTG CCACGGCTGACCTTGCATACCCCGGTTTTTGGCCTCGGTGGCCCTGATGGCCCGCTGCCTTACGCCTATCAGGAATGGTTGCAACAACGAGTCCGTGCCG GGGATCGGGGCACGCTGGCGTTTCTCGACCTGTTTCAGCACCGCTTGCTGAGCCTGCTATACAGAGTCCAGCTTAAACACCGGATTGCTTTGCCTTATCA GCGCAGCGAACACAGCCCGGTTTACCAGCAGTTGCAAGCGCTTTGCGGGTTGACCAGCCAGCCGCCCGGCATGCCTGTGTCGGTTCCGGAAAAGGCACTG ATTGCCCGGGCGGCGTTGCTGGCCAACGGGCGGCGTTCGGTGGCCGGTTTGCAGAGCTTGCTCCGCCATCACTTCGACCTGAACGTGCGGATTGAGGACT TCCTCGGCGGCTGGCGGCGCATTCCGCCAGCCAGCCGCACGGTGCTCGGTCGCCAGGGGCGCAACCTGAGTCTGGGCCGCAACGCGGTCTGTGGCAGTCG GGCCTGGGACCAGCAACAGGGGGTGCGCATTCATCTGGGCCCACTGCAGCCGACCCGGGCTGACAGTTTTATGCCAGGGCGTTTGAGCCATCGACAACTG GCAGCGCTGGTGAGCTTCTATTTTGGTGCCGAACTGCAGTGTGAGTTGCGCATCCATGTCGACAAGAGCGACATCCAGCGGCTTGGTCAGGTACACCAGC CAGGCCTGGGGCAGGGCAGTTGGCTGAACCGTGAAGTACGCCAGGGTAATTACTGGATCGACGTCAGCCTCGGTAAAAACGGAGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CATGGAAATCGCAAGCCTGATCGGGCGCCTCAACAGCCATTGTCGCGATGCCATGGAGCGCGCCGCGCAGCGTGCCTGGCAGGGTGGCCATGAATTTGTC GAGGTCGAGCATCTACTGCTCGAATTGCTCGATGCGCCCGAAGGGGATCTGGCGGTCTTGTTACCGGCCCTCGGGGTCAACAGTGCGCCGCTGTGCGCTG AAATCCAGCGAACCTTGCACGGCTTTACGCCAGGCAATAGCCACAGCCCAACCCTGTCCCGACAGCTGTTGGGGTTGATCGAGGCAGCCGTGCAGCAGTC CTGCGCGCAAGGCATTGCCAGCGTGCGTTCGGCACTGCTGTTATTGACCTTGCTGGAGCACCAAGCGCAGTACCCGGAGGTGTTCAGTCGTCTGCCCGGG CTGCGCTCGGTATCACCGCAAAAGCTGCGCGAGCAATTGCCGGACTGCATCGCACACTCGGGCGAATCGCAGAACCCGCCAGCCAACGCGGCCAGCGTAC
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Amino Acid Sequence |
>hypothetical protein
MATREHRGPGTLSARLRWAPQRFEWLQALQILEREQPHLPALGCSNDPQQEAVRLRGPLLPVFSPSQISSLQLAPQAFAPLSALRPPLVYRHLHRKPLVV PRLTLHTPVFGLGGPDGPLPYAYQEWLQQRVRAGDRGTLAFLDLFQHRLLSLLYRVQLKHRIALPYQRSEHSPVYQQLQALCGLTSQPPGMPVSVPEKAL IARAALLANGRRSVAGLQSLLRHHFDLNVRIEDFLGGWRRIPPASRTVLGRQGRNLSLGRNAVCGSRAWDQQQGVRIHLGPLQPTRADSFMPGRLSHRQL AALVSFYFGAELQCELRIHVDKSDIQRLGQVHQPGLGQGSWLNREVRQGNYWIDVSLGKNGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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