Strain | Pseudomonas sp. StFLB209 DNA, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGCGTCGCGCTGTCGCGCAGCAAACAGGGAACCTCATAGGAGCAGCTTTAGCTGCGAAAGCTTCTTAGCTAAAGCCAAAACTGGTCAGTTAGACCTGTGG TAGCCAGCTTGCTGGCGAAGGCGGCGGCACATTCGCAGCAGATGTAGTGTTTTTACTGGCCTCTTCGCGACCAAGGTCGCTCCCATAGAGATTTGTGATG ACTAAATGATCAGTACTGCAGCTAAAGCTGCTTCTACAGGCGGATCGCCGCCCGGCCGCTCATACAGAATTGTGCGTAATAATCGGGATACCTGCTCAAA CCAAGTACAGAATCGCGACAAAGCAGTGCAAATCATCGGCTGGACGCCCTTTGCTAGTGCGTTTTGTGCGCAATTTGTTTAGCCTTGCTGCCTTCGCGGT GCAGCCCGGCTCCCACAAGGAACCCCAGCCCTGCGCCCCTGCTTCACAAGAGCGGCAGATCATCCTTTTCGTTCCTGATTCGGCAGTGTGGTTTTCTTAG
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DNA Sequence for Gene |
>PSCI_RS19385
ATGAAAGTTTTGAAAGGCCAGGACATCCTGGCATTGGGCTTCATGACGTTCGCGCTGTTCGTCGGTGCCGGTAACATCATTTTCCCGCCTATCGTCGGCC TGCAGGCCGGCCCCCACGTATGGATCGCTGCATTGGGCTTTCTGGTCACCGCCGTGGGCCTGCCAGTGCTCACCGTGGTCGCCCTGGCCCGGGTGGGTGG CGCCATGGACAGCTTGAGCAGTCCCATCGGCAGAGTCGCCGGGGTTGTCCTGGCCACCGTCTGCTACCTGGCCGTAGGCCCATTCTTCGCCACGCCACGC ACGGCAACGGTGTCTTTCGAAGTCGGTGTCGCACCGCTGACCGGCAACAGCCCGACCGCGTTGTTTATCTACAGCCTGGTGTATTTTCTGCTGGTGCTGA TGGTCTCGCTCTATCCGGGCCGCCTGCTCGACACCGTCGGCCGGGTCTTGGGGCCGTTGAAGATCGTCGCCCTTGGCGCATTGGGCATCGCGGCCTTCAT GTTGCCGGCCGGTGACATCGGCTCGGCCCAGCCTGCTTATGCCGCTGGTGCGTTCTCCAAGGGCTTTACCGAAGGCTATCTGACCATGGATACCCTGGGC GCTCTGGTATTCGGGATCGTGATCGTCAATGCCATCCGTTCTCGTGGTGTCGAGTCCCCGCAACTGATTACCCGCTATGCAATTATCGCCGGCCTGATCG CTGGGGTAGGGCTGGCGCTGGTGTATGTCAGCCTGTTCCGCCTGGGCTCGGGCAGTCATGTGATCGCCGCCGGCGCGAGTAACGGGGCAGCGGTGTTGCA TGCCTACGTGCAATACACCTTTGGCTCACTGGGCAGTGGTTTTCTCGCGGTCCTGATTGCTCTGGCTTGCCTGGTCACGGCGGTGGGCCTGACCTGCGCT TGCGCGGAGTACTTCAGCCGTCTGCTGCCCCTGTCGTACCGCACCCTGGTGATCGGTCTGGCGGCCTTCTCGCTGCTGGTGTCCAATCTGGGGCTGACCC GCCTGATCGAGTTCTCGGTGCCGGTGCTGACCGGCATCTACCCGCCGTGCATCGTGCTGGTGGCGTTGAGCTTCTGTCAGGGGGCATGGCACAGCGCAAC CAGAGTAGTCGCGCCGGTGATGCTGGTGTCGTTGCTGTTCGGCACTGTCGATGCGCTGAAAACGGCGGGTCTGACCGCCTGGCTGCCGGAGTCGCTGGCC AACCTGCCACTGAGCGCAGAGGGGCTGGCCTGGCTGGTGCCGTCGGTCATTACCCTGGCCGCTGCGGTCGTGGTCGATCGGATGATCGGCAAGCCGCGCG AAGTACTGGCATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGATGAGTCATTTATAGGGAAGTGTAAGTTTTCGGCCTCCCCAACTGTAATGCTTACATGACGCTACAAATAAATAAGGCCCGCATTGAGCGGGCCTTAT TTATTTAAGCCGGGTAATTAAGGCTTGGTGCCGGTTTCCGGAGTGGTGGCCGGTGCCGGAGTGGTCGGTACCTGGCTTGCGTTTTCCTCTGCACGTTGCT GAGCGGCCTCGCTGTTCTTCTGGGCCGCTTCCTGGCTTTCCTTGGCCGCGTCATTCACTTTTTCCTGAGCCTTCTGCATCGACTCCTGGGATTGTTCGGC GGCTTTGTTAGCCTCTTGCTGAGTGTTTTCTGATTTTTTGTCGCAAGCAGCCAGGCCTACAGTGGCAGCCAGCATCAAGGCATAAGCAAAAGATTTACGC ATGAGGTGTTTCTCCTTATTGAATACCTAACGTGCCTAAGAACGCGGTGCCACAAGGGAAGTTCCGACGCATTGTCAGAATATTAAAATGCTATGATCGG
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Amino Acid Sequence |
>branched-chain amino acid ABC transporter substrate-binding protein
MKVLKGQDILALGFMTFALFVGAGNIIFPPIVGLQAGPHVWIAALGFLVTAVGLPVLTVVALARVGGAMDSLSSPIGRVAGVVLATVCYLAVGPFFATPR TATVSFEVGVAPLTGNSPTALFIYSLVYFLLVLMVSLYPGRLLDTVGRVLGPLKIVALGALGIAAFMLPAGDIGSAQPAYAAGAFSKGFTEGYLTMDTLG ALVFGIVIVNAIRSRGVESPQLITRYAIIAGLIAGVGLALVYVSLFRLGSGSHVIAAGASNGAAVLHAYVQYTFGSLGSGFLAVLIALACLVTAVGLTCA CAEYFSRLLPLSYRTLVIGLAAFSLLVSNLGLTRLIEFSVPVLTGIYPPCIVLVALSFCQGAWHSATRVVAPVMLVSLLFGTVDALKTAGLTAWLPESLA NLPLSAEGLAWLVPSVITLAAAVVVDRMIGKPREVLA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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