Pseudomonas sp. StFLB209, PSCI_RS18445

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10422
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004129 cytochrome-c oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10422
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009060 aerobic respiration
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10422
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10422
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0045278 plasma membrane respiratory chain complex IV
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd01661
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pses01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pses00190 Oxidative phosphorylation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pses02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR00780 JCVI: cytochrome-c oxidase, cbb3-type subunit I IPR004677 Cytochrome c oxidase cbb3-type, subunit I 8 463 0.0
PANTHER PTHR10422 CYTOCHROME C OXIDASE SUBUNIT 1 IPR000883 Cytochrome c oxidase subunit I 7 463 1.3E-63
Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I IPR000883 Cytochrome c oxidase subunit I 13 442 3.0E-115
SUPERFAMILY SSF81442 Cytochrome c oxidase subunit I-like IPR036927 Cytochrome c oxidase-like, subunit I superfamily 8 464 6.15E-124
FunFam G3DSA:1.20.210.10:FF:000005 Cytochrome c oxidase, cbb3-type, subunit I - - 1 469 0.0
Gene3D G3DSA:1.20.210.10 - IPR036927 Cytochrome c oxidase-like, subunit I superfamily 2 470 0.0
CDD cd01661 cbb3_Oxidase_I IPR004677 Cytochrome c oxidase cbb3-type, subunit I 5 459 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.