Pseudomonas sp. StFLB209, PSCI_RS17610 (flhF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. StFLB209 DNA, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AATGTGCTGCAGGCGCTGCTGGCCGAGCATGTGCCGGTGCGTGATATCCGCACGATTGCCGAGGCCATCGCGAACAATGCGGCCAGGAGTCAAGATACCG CCGCGTTGGTGGCTGTGGTGCGGGTCGGGTTGAGCCGGGCGATCGTGCAAAGCATTGTAGGGACTGAGACAGAGCTGCCTGTCATCACCCTTGAGCCTAG ATTGGAACAGATTTTGCTAAATAGTATGCAGAAGGCGGGTCAGGGTCAGGAAGAAGGCGTTCTTCTGGAGCCAAGCATGGCCGAGAAGCTGCAACGCTCG TTGATTGAGGCGGCGCAGCGTCAAGAGATGCAAGGCTCGCCGGTGATTTTGCTGGTGGCAGGTCCGATTCGGGCCATGCTGTCACGATTTGGACGATTGG CTGTACCGAACATGCATGTTCTGGCGTACCAGGAAATTCCTGACAACAAGCAAGTCACCATCGTAGCGACTGTCGGGCCTAACGGCTGAGGTAGTGAGTC
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| DNA Sequence for Gene |
>PSCI_RS17610
|flhF
ATGCAAGTTAAGCGTTTTTTCGCCGCCGATATGCGTCAAGCCATGAAACTGGTTCGCGATGAGCTGGGCGCCGAGGCGGCCATCATCGGAAATCGGCGCA TTGCCGGTGGCGTTGAGCTGACTGCTGCTCTTGATTACAAGCTGTCTGCGCTGGCGCCGCGGGTGCCGAACATGGAGCTTGAAGACGAGCTGCGCAAGAC TCAGTCGCGGATCGTCTCGGCGCAAGCTGAACTCGAAAGTCGCAACGAAGGCGATGACGTATCGAGCAACCGTCAGTTGTTTTCTGGCTTGCCGCTGAGC GCTGCCGACCGGCACATCGAGCCGACCCTTGAAGAACCGCCGCGTCCTGCTGTTGCCGTCGCTGCACCCGGCGTTGCCGAGCCGACGCTGAACCAGCGTG CGTTTGACTCGATGCGCTCGGAGCTCAACGGCTTGCGCGAGCTGCTGGAAGTCCAGTTGGGTTCGCTGGCCTGGACGCAATTGCAGGGCAGTCGTCCGCA GCAGGCCAACCTGTGGCGGCGTCTGCAGCGCGTTGGCCTGTCCGGCCCGCTGTCGCGGGATCTGCTGGATATGGTTCCCGATATCGACGATCCCCGTCAT GCCTGGCGCATGTTGCTGGCGCATCTGGCGCGGATGATCAATGTGCCTGACAACGAGCCGCTGGAAGAGGGCGGGGTGATCGCGATGGTCGGTCCGGCAG GGATGGGCAAGACCACTACGCTGGCCAAGCTGGCGGCGCGTTACGTGCTCAAGTACGGCGCGCAGAATATCGCGCTGGTGAGCATGGACAGCTTCCGGAT CGGTGCCCAGGAGCAGCTCAAGACCCTTGGGCGTATTCTCAATGTGCCGGTGACCCACGTCGATCCGGGACAGTCCCTGGCCCAGGCGCTCGAACCGCTG ATCCGCAAGCGTGTGGTGCTGATCGATACCGCCGGCCTGCAAGCCAGCGATCCGGCGCTGCGCCTGCAGCTTGAAAGCCTGGCCGGGCGCGGGATTCGCT CGCGCAACTATCTGGTCCTGGCCACTACCAGCCAGAAGCAGGTGTTGACCGCCGCTTACCACAGCTACAAACGCTGCGGGCTGGCCGGCTGCATCCTGAC CAAACTGGATGAAACTGCCAGCCTGGGTGAAGTGCTGAGCCTTGCGATCGGGCATGAACTCCCCGTGGCCTATCTGACCGATGGGCCGCGTATTCCTGAT GATTTGCATCTGCCACGCCGCCATCAACTGGTGAGTCGGGCCGTCAGTGTGCAAATGCAGGATGAACCCAGCGAAGAGGCTATGGCGGACATGTTCGCCG ACCTTTATCACAACCCCGGCAAGCGAGTGGGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTGATGAACACGACTAAAAAATTACTGCATCGGTGGTCTGCCAGGCATTGTTCGTCACGGAACGTGCAGCCCGTAATGTGGCTCCAGTCTACGCATGACA AGGTAAAGAAATAACATGGGCAGCATGCATCCCGTACAGGTTATCGCCGTGACCGGCGGCAAAGGTGGCGTTGGCAAGACCAACGTTTCAGTGAATCTGT CGCTGGCGCTGGCCGAGCTCGGCCGTCGCGTCATGCTGCTTGATGCTGATCTTGGTCTGGCCAACGTTGATGTTTTGCTGGGCCTTACGCCCAAACGCAC CCTGGCCGATGTCATCGAGGGCCGCTGTGAGCTGCGTGACGTCCTGCTCCAGGGGCCTGGCGGAGTGCGTATCGTGCCAGCGGCCTCCGGTACCCAGAGC ATGGTGCACCTGGCGCCCGCGCAGCATGCCGGCCTGATCCAGGCGTTCAGCGAGCTTGGCGACAATCTTGATGTGCTGGTGATCGACACCGCAGCCGGTA
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| Amino Acid Sequence |
>flagellar biosynthesis regulator FlhF
MQVKRFFAADMRQAMKLVRDELGAEAAIIGNRRIAGGVELTAALDYKLSALAPRVPNMELEDELRKTQSRIVSAQAELESRNEGDDVSSNRQLFSGLPLS AADRHIEPTLEEPPRPAVAVAAPGVAEPTLNQRAFDSMRSELNGLRELLEVQLGSLAWTQLQGSRPQQANLWRRLQRVGLSGPLSRDLLDMVPDIDDPRH AWRMLLAHLARMINVPDNEPLEEGGVIAMVGPAGMGKTTTLAKLAARYVLKYGAQNIALVSMDSFRIGAQEQLKTLGRILNVPVTHVDPGQSLAQALEPL IRKRVVLIDTAGLQASDPALRLQLESLAGRGIRSRNYLVLATTSQKQVLTAAYHSYKRCGLAGCILTKLDETASLGEVLSLAIGHELPVAYLTDGPRIPD DLHLPRRHQLVSRAVSVQMQDEPSEEAMADMFADLYHNPGKRVG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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