Pseudomonas sp. StFLB209, PSCI_RS17525

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00207
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009288 bacterial-type flagellum
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00207
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003774 motor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00207
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0071973 bacterial-type flagellum-dependent cell motility
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00207
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pses02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pses02040 Flagellar assembly 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:1.10.220.30:FF:000001 Flagellar motor switch protein FliG - - 200 338 1.2E-60
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 39 65 3.9E-66
Pfam PF14842 FliG N-terminal domain IPR028263 Flagellar motor switch protein FliG, N-terminal domain 9 109 4.4E-34
NCBIfam TIGR00207 JCVI: flagellar motor switch protein FliG IPR000090 Flagellar motor switch protein FliG 8 336 1.3E-100
FunFam G3DSA:1.10.220.30:FF:000004 Flagellar motor switch protein FliG - - 94 196 1.2E-51
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 10 26 3.9E-66
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 253 273 3.9E-66
Gene3D G3DSA:1.10.220.30 - - - 6 97 7.5E-24
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 231 251 3.9E-66
SUPERFAMILY SSF48029 FliG IPR011002 Flagellar motor switch protein FliG, alpha-helical 10 122 5.36E-25
SUPERFAMILY SSF48029 FliG IPR011002 Flagellar motor switch protein FliG, alpha-helical 119 330 2.49E-68
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 119 142 3.9E-66
Pfam PF14841 FliG middle domain IPR032779 Flagellar motor switch protein FliG, middle domain 120 193 4.6E-23
PANTHER PTHR30534 FLAGELLAR MOTOR SWITCH PROTEIN FLIG IPR000090 Flagellar motor switch protein FliG 7 337 1.1E-110
Pfam PF01706 FliG C-terminal domain IPR023087 Flagellar motor switch protein FliG, C-terminal 223 329 6.3E-42
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 200 225 3.9E-66
FunFam G3DSA:1.10.220.30:FF:000007 Flagellar motor switch protein FliG - - 6 90 4.0E-41
PIRSF PIRSF003161 FliG IPR000090 Flagellar motor switch protein FliG 4 338 2.2E-118
Gene3D G3DSA:1.10.220.30 - - - 200 338 2.8E-46
PRINTS PR00954 Flagellar motor switch protein FliG signature IPR000090 Flagellar motor switch protein FliG 277 303 3.9E-66
Gene3D G3DSA:1.10.220.30 - - - 98 194 1.7E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.