Pseudomonas sp. StFLB209, PSCI_RS13025

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0009002	serine-type D-Ala-D-Ala carboxypeptidase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00725	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006508	proteolysis	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00725	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0004180	carboxypeptidase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF69189	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pses00550	Peptidoglycan biosynthesis	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pses01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00725	D-Ala-D-Ala carboxypeptidase 1 (S11) family signature	IPR018044	Peptidase S11, D-alanyl-D-alanine carboxypeptidase A	63	74	9.4E-15
PANTHER	PTHR21581	D-ALANYL-D-ALANINE CARBOXYPEPTIDASE	-	-	32	283	6.2E-43
PRINTS	PR00725	D-Ala-D-Ala carboxypeptidase 1 (S11) family signature	IPR018044	Peptidase S11, D-alanyl-D-alanine carboxypeptidase A	116	133	9.4E-15
SMART	SM00936	PBP5_C_2	IPR012907	Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal	276	366	1.8E-34
Pfam	PF00768	D-alanyl-D-alanine carboxypeptidase	IPR001967	Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal	27	256	2.0E-85
Pfam	PF07943	Penicillin-binding protein 5, C-terminal domain	IPR012907	Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal	276	366	5.8E-25
PRINTS	PR00725	D-Ala-D-Ala carboxypeptidase 1 (S11) family signature	IPR018044	Peptidase S11, D-alanyl-D-alanine carboxypeptidase A	143	156	9.4E-15
Gene3D	G3DSA:2.60.410.10	-	IPR037167	D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily	276	366	1.5E-27
SUPERFAMILY	SSF69189	Penicillin-binding protein associated domain	IPR015956	Penicillin-binding protein, C-terminal domain superfamily	276	368	1.47E-25
Gene3D	G3DSA:3.40.710.10	-	IPR012338	Beta-lactamase/transpeptidase-like	25	275	5.1E-97
SUPERFAMILY	SSF56601	beta-lactamase/transpeptidase-like	IPR012338	Beta-lactamase/transpeptidase-like	8	276	9.8E-89

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.