Strain | Pseudomonas sp. StFLB209 DNA, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TGTTGAGGTAATCGATCATTGCCGCCAGGGTGGTCGACTTGCCTGACCCGGTAGGCCCGGTGACCAGAATCAGCCCGCGTGGCACGTCAGTGATGCGCCG AAAGTTCTCGCCCATGCCGAGGTCATCAAGGGTGAGGATCTTCGACGGAATGGTGCGAAACACCGCGCCACTGCCACGGTTCTGGTTGAAAGCGTTGACC CGAAAGCGCGCCACGCCGGGGACTTCGAAAGAAAAGTCGGTTTCCAGGCGTTCTTCATAATCCTGGCGCTGCTTGTCGTTCATGATGTCGTAAATCAGCG CCTTGACCTGCTTGGCATCCAGCGCCGGCAGGTTGATCCGCCGCACGTCACCGTCGACACGAATCATCGGTGGCAAGCCTGCGGAAAGGTGCAGATCGGA GGCGCCCTGTTTGGCACTGAAGGCCAGCAGTTCGGTAATATCCATACAGCTCCTCAATCACATAGAATGCCGCAGACCTCAGTTCTGCCGGCCCGAATCA
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DNA Sequence for Gene |
>PSCI_RS10140
ATGTCCACGATAGCAGCGAATATATCAACGCTCGAACAACGAATCCGCGTCGCGGCCCAGGCAGCCCGGCGCGACCCGGACAGCATCGGCCTGCTGGCAG TGAGCAAGACCAAGCCCGCCGAGGCCTTGCGCGAAGCCTTCGCCGCCGGCCTGCGGCACTTTGGCGAAAATTACCTGCAAGAAGCACTGGGCAAACAGCA GCAATTGGCCGACCTGCCCTTGCACTGGCATTTCATCGGCCCCATTCAGTCGAACAAGACCCGCTCGCTTGCCGAGCACTTTGACTGGGTACACTCTGTG GACCGCCTGAAAATAGCCCAACGCCTGAGCGAGCAACGCCCTGAACACCTGGCACCGTTGAATATCTGTATCCAGGTCAATGTCAGCGGTGAAGCCAGCA AGTCTGGCTGCACGCCTGAAGAGCTGCCGCAACTGGCGGCGGCCATTGCCAGCCTGCCACGACTGAAGTTGCGCGGCCTGATGGCGATTCCGGAACCGAC CGACGATGTCGCAGCGCAGCATGCAGCCTTTGCCAGAGTCCGTATCCTGCAAGAACAACTGCCGCAAGCACTGGACACCCTTTCAATGGGCATGAGCCAT GACCTGGAGGCCGCCATCAGTGAAGGCGCCACCTGGGTGCGTATCGGCACCGCGCTCTTTGGCGCCCGCGACTACAGCCAGACACACGGCCAGCCATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCTCTGAACTCAAGGAAACCTGTCATGAGCAAGACTCGTATCGCCTTCATCGGCGCCGGCAACATGGCCGCCAGCCTGATCGGCGGCCTGCGTGCCCAGG GCGTTGAAGCCGACGACATCCGCGCCGCCGATCCGGGGGCCGAGACCCGTGGCCGGATTGCTGCCGAGCACGGCATTGCAGTGGTGGCCGACAACGCCGA CGCCGTCACGGGCGCCGATGTGGTGCTGCTGGCGGTCAAGCCGCAAATGATGAAAGCGGTCTGCCAGGATTTGGCGCCGAGCCTGAAGCCTGAGCAACTC ATCGTTTCGGTGGCCGCCGGCATCACCTGCGCCAGCCTCAACCAGTGGCTGGGCGAACAGCAACCGGTGGTGCGCTGCATGCCCAACACCCCGGCCCTGC TGCGCCAGGGCGTCAGCGGCCTGTATGCCACCGACAAGGTCAGTGATGTCCAGCGCCAGCAGGCCGAGCAACTGCTGTCGGCCGTCGGTGTCGCCCTGTG
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Amino Acid Sequence |
>hypothetical protein
MSTIAANISTLEQRIRVAAQAARRDPDSIGLLAVSKTKPAEALREAFAAGLRHFGENYLQEALGKQQQLADLPLHWHFIGPIQSNKTRSLAEHFDWVHSV DRLKIAQRLSEQRPEHLAPLNICIQVNVSGEASKSGCTPEELPQLAAAIASLPRLKLRGLMAIPEPTDDVAAQHAAFARVRILQEQLPQALDTLSMGMSH DLEAAISEGATWVRIGTALFGARDYSQTHGQP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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