Pseudomonas sp. StFLB209, PSCI_RS08245

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00512
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00672
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00512
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pses02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 581 594 1.8E-18
SMART SM00091 pas_2 IPR000014 PAS domain 258 324 8.0E-6
Gene3D G3DSA:1.20.120.880 Histidine kinase (KinB), sensor domain IPR038320 KinB, N-terminal domain superfamily 37 168 4.3E-42
Gene3D G3DSA:1.10.287.130 - - - 365 445 3.3E-16
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 375 443 1.3E-15
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 448 595 2.5E-45
CDD cd00075 HATPase - - 494 593 7.5395E-35
PANTHER PTHR44936 SENSOR PROTEIN CREC - - 4 594 2.0E-86
SUPERFAMILY SSF158472 HAMP domain-like - - 195 244 5.23E-7
Pfam PF16767 Sensor domain of alginate biosynthesis sensor protein KinB IPR031909 Alginate biosynthesis sensor protein KinB, sensor domain 39 158 3.8E-33
CDD cd19409 KinB_sensor IPR031909 Alginate biosynthesis sensor protein KinB, sensor domain 45 157 5.93096E-33
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 376 443 4.7E-12
Gene3D G3DSA:1.10.8.500 HAMP domain in histidine kinase - - 194 245 1.7E-5
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 251 367 7.68E-14
Pfam PF00672 HAMP domain IPR003660 HAMP domain 193 243 4.2E-10
Pfam PF08448 PAS fold IPR013656 PAS fold-4 264 370 4.5E-10
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 257 373 1.9E-10
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 557 575 1.8E-18
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 489 595 4.2E-32
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 432 595 4.45E-46
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 490 594 2.7E-24
CDD cd06225 HAMP - - 200 242 1.4636E-7
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 360 443 2.35E-16
SMART SM00304 HAMP_11 IPR003660 HAMP domain 195 247 6.6E-11
FunFam G3DSA:3.30.565.10:FF:000006 Sensor histidine kinase WalK - - 448 595 2.1E-37
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 526 540 1.8E-18
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 373 439 5.76343E-12
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 544 554 1.8E-18
CDD cd00130 PAS IPR000014 PAS domain 267 366 2.65897E-6
Gene3D G3DSA:3.30.450.20 PAS domain - - 246 364 2.0E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.