Pseudomonas sp. StFLB209, PSCI_RS07635
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. StFLB209 DNA, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGCGTTTATCTGGCGTCGGTGTCGACCTGAACAGGCGACCGACACGTTACAAAGCCAGGCACTGAGCTTAGACTTGAGACGGGTTTGTTTTCCTGGGGCA AGTCCACCAATTCGGGAGAGAGTTTCATGAAACTAGTCACTGCAATCATCAAGCCGTTCAAACTCGATGACGTACGCGAATCGTTGTCCGAGATCGGCGT GCAGGGCATCACTGTCACTGAGGTCAAAGGCTTCGGACGTCAGAAAGGTCACACTGAGCTGTATCGCGGTGCTGAATACGTTGTCGACTTCCTTCCCAAG GTGAAGATCGATGTCGCCATTGACGACAAGGATCTGGACCGGGTTATCGAAGCCATTACCAAGGCTGCCAACACCGGCAAGATTGGCGACGGCAAGATTT TCGTCGTGAATCTGGAACAGGCGATCCGCATCCGTACCGGCGAAACCGATACCGACGCGATCTAAGCCGCCAACCCCCCTAAAGCCCCAGGAGAAACACT
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| DNA Sequence for Gene |
>PSCI_RS07635
ATGACTCTGCGTCAATTCGCAGGGCTTGGAGCCCTGTTGTCCCTCGCTTTACCTGGTCTGGCCCTGGCGGCTGAGCCTGCTGCAGAACCTGTACTCAATT CCGGTGACACCGCATGGATGCTGACCGCCACCGCGCTGGTCCTGTTCATGACCATTCCGGGCCTGGCACTGTTCTACAGCGGCATGGTTCGCTCGAAAAA CGTTCTCTCGGTGATGATGCAGTGTTTTGCCATTACCGGTCTTATCAGCATCCTGTGGGTGGTCTACGGCTATAGCCTGGCGTTCGACACGACCGGCATG GAAGAAGGCGTGGTCAACTTCAGTTCGTTTGTCGGCGGCTTCGAGAAAGCCTTCCTGGCGGGCCTGACCCCTTCGAGCCTGACTGGCGCTGCTGCGCTGT TCCCTGAGGCGGTATTCATTACCTTCCAGATGACCTTCGCGATCATCACGCCGGCGTTGATCGTCGGTGCCTTCGCCGAGCGCATGAAGTTCTCCGCGAT GCTGGTGTTCATGGCCATCTGGTTCACCCTGGTCTACGCACCGATCGCTCACATGGTCTGGGGCGGTGTTGGTGGCCTGATGTGGGACTGGGGCGTACTG GACTTTGCCGGTGGCACCGTGGTCCACATCAATGCCGGTATCGCGGGCCTGGTGGCTTGCCTGGTACTGGGCAAACGTAAAGGCTACCCGACCACGCCAA TGGCTCCGCACAACCTGGGTTACACCCTGATCGGCGCGGCCATGCTGTGGATCGGCTGGTTCGGCTTCAACGCCGGCTCCGCTGCCGCCGCCAACGGCAC CGCTGGCATGGCGATGCTGGTCACCCAGATCGCAACCGCGGCTGCAGCGTTGGGCTGGATGTTCGCCGAGTGGCTGACCCACGGCAAGCCAAGTGCTCTG GGCATCGCCTCGGGTGTGGTGGCAGGCCTGGTGGCAATCACCCCGGCCGCCGGTACCGCAGGCCCGATGGGCGCTCTGGTGATCGGCCTGGTCTCGGGTG TGGTGTGTTTCTTCTGCGCCACCAGCCTCAAGCGCAAACTGGGTTATGACGACTCGCTGGATGCCTTCGGCGTGCACGGTGTCGGCGGTATCGTCGGTGC GATCCTCACTGGCGTGTTTGCAGCCCCTGCTCTGGGCGGCTTCGGCACCGTGACTGACATCGGCACCCAGGTCTGGGTGCAGTTCAAGGGTGTCGCCTTC ACCGTGGTGTACACCGCAATCGTGACCTACGTGATCCTCAAGGTGCTGGACGTGGTCATGGGGCTGCGGGTCAACGAAGAAGAAGAAGTCGTTGGTCTGG ACCTTGCGCAACACAACGAGCGCGGCTACAACCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCTTCTGCGAAAAATGCCCGGCTAGCCGGGCATTTTTTTTGTCTGAAATTTATGGATCACCCGCGCTGCGATGCTGTCATTGATTGTGCATCACGCAGT GTTATAGATCGTTTGCGCCGGTCTCGACGGCACTTTTGCCAGCAACGGCTATTGCTGACAGTAATGTAGGTTTATGGCGCTTTGCTTTTTTCTCAGGCGA GTTAGAATGCGCGCCGAACGTGTGGAGAACGGTATGTGGCAGCAATCAGTGGTCACCCTGCGAGAGCGGTCGCGCGGGTTTCACCTGGTCACCGATGAGA TCGTTGCCGGCGTGTCCGGGCTACGGGAGTGTCGGGTCGGATTGCTGCATCTGTGGTTGCAACATACCTCGGCGTCGTTGACCGTCAACGAAAACGCCGA CCCGGCTGTGCGTCGTGACTTCGAGCGATTTTTCAACCGCCTGGTGCCTCAGGGTGTGGCGGGCTTCGAACACAACGATGAAGGTCCTGATGACCTGCCG
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| Amino Acid Sequence |
>ammonia channel protein
MTLRQFAGLGALLSLALPGLALAAEPAAEPVLNSGDTAWMLTATALVLFMTIPGLALFYSGMVRSKNVLSVMMQCFAITGLISILWVVYGYSLAFDTTGM EEGVVNFSSFVGGFEKAFLAGLTPSSLTGAAALFPEAVFITFQMTFAIITPALIVGAFAERMKFSAMLVFMAIWFTLVYAPIAHMVWGGVGGLMWDWGVL DFAGGTVVHINAGIAGLVACLVLGKRKGYPTTPMAPHNLGYTLIGAAMLWIGWFGFNAGSAAAANGTAGMAMLVTQIATAAAALGWMFAEWLTHGKPSAL GIASGVVAGLVAITPAAGTAGPMGALVIGLVSGVVCFFCATSLKRKLGYDDSLDAFGVHGVGGIVGAILTGVFAAPALGGFGTVTDIGTQVWVQFKGVAF TVVYTAIVTYVILKVLDVVMGLRVNEEEEVVGLDLAQHNERGYNL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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