Pseudomonas sp. StFLB209, PSCI_RS06435

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0050660 flavin adenine dinucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.540.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003995 acyl-CoA dehydrogenase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd01156
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47203
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pses00280 Valine, leucine and isoleucine degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pses01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02770 Acyl-CoA dehydrogenase, middle domain IPR006091 Acyl-CoA oxidase/dehydrogenase, middle domain 126 221 4.6E-27
PIRSF PIRSF016578 PIGM - - 12 97 0.0037
Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPR009075 Acyl-CoA dehydrogenase/oxidase, C-terminal 233 386 7.3E-38
Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal 11 122 3.6E-39
PANTHER PTHR43884 ACYL-COA DEHYDROGENASE - - 11 389 0.0
PIRSF PIRSF016578 PIGM - - 141 391 5.0E-12
Gene3D G3DSA:2.40.110.10 - IPR046373 Acyl-CoA oxidase/dehydrogenase, middle domain superfamily 125 238 8.5E-44
SUPERFAMILY SSF56645 Acyl-CoA dehydrogenase NM domain-like IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily 5 246 2.49E-88
SUPERFAMILY SSF47203 Acyl-CoA dehydrogenase C-terminal domain-like IPR036250 Acyl-CoA dehydrogenase-like, C-terminal 232 389 1.21E-42
Gene3D G3DSA:1.20.140.10 - - - 239 386 1.7E-42
FunFam G3DSA:1.10.540.10:FF:000022 Isovaleryl-CoA dehydrogenase isoform 2 - - 1 123 2.3E-57
FunFam G3DSA:2.40.110.10:FF:000004 Isovaleryl-CoA dehydrogenase, mitochondrial - - 125 238 7.8E-57
Gene3D G3DSA:1.10.540.10 - IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily 2 123 3.4E-41
FunFam G3DSA:1.20.140.10:FF:000003 isovaleryl-CoA dehydrogenase, mitochondrial - - 239 388 6.0E-73
CDD cd01156 IVD IPR034183 Isovaleryl-CoA dehydrogenase 9 388 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.