Pseudomonas sp. StFLB209, PSCI_RS04320
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. StFLB209 DNA, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCGTCACACCCGAGACCGAAAATACAACCCACTATTTCTGGTCGATGGCCACCAACCCCGAAAGCAATCATGCAGAGGTCAAGGCAAAGGTCATCGAACA AACCGCGCTGACCTTTGATGAAGACAAAATCATCATTGAGGCCCAGTACAAGAACATGTGCCGATTCGGCGAACGCCCCATGATCGATATCCATGTCGAC GTCGGCGCAAATCGGGCGCGCAAAATCATTGAGCGCCTGCGCCAATCCGACCCGGCATGAGGCCGCTACACCTGCCCCGCCCCCGTCTGCAAGTCCAACG GCAGACTGACTGAAATGAGATGAAAGCAACGCCTTTGTGACTCGTCGAGAAACTGAGGTGCTGGTTAACCCGTGCGTGCTGTTTAAACAACAATAAAAGG TATAGCGCTATGTGTAAGCAATCTTCCCGATTTATCGGGCAGGCTTCGGCCGCCTTGCTTTTGCTCAATTCATTGCCATTGAACAAGGAGGTTTGACGAT
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| DNA Sequence for Gene |
>PSCI_RS04320
ATGGACAAGTCAATTGGGCAACTAATGGACGAAAAACCCATGGTCAGTTCTCAATGGGGCGTGATCGCTCTTTGCATCCTGATCAACATGCTCGACGGCT TCGACGTGCTGGTAATGGCCTTCACCGCCGCGTCGGTTTCGGCAGACTGGGGACTCAACGGCATCCGCGTCGGCTACCTGCTCAGTGCCGGATTGGTCGG CATGGCAATCGGCTCGTTGTTTATTGCGCCCTGGGCGGACCGGTTCGGCAGACGCCCGCTGATCATGCTCTGCGTGAGCATCGCCGGACTGGGTATGCTC GCCTCCTCTCAAGCAAACAGTTTCGAAACACTCGCCATTCTGCGGCTGATTACGGGGCTTGGCATTGGTGGGGTTCTGGCCAGCAGTTACGTGATTGCCG GCGAATACGCCAACAAAAAATGGCGCGGGCTGGCAATCAGTTTGCAGTCGACGGCCTACGCGCTGGGTGCAACGATTGGCGGGATCATTGCCGCTCAGAT CATCCCGACCCAAGGATGGCGCTCGGTGTTTCTGTACGGCGGCATCACCACGCTCTCGACACTGCCGCTGCTGTTTCTCTGGCTTCCAGAGTCACTTGCC TTTCTGACGTCTCGCCAACCGGTCGGCGCCCTGGCCAAGATCAATAAACTGCTGGTACGCGTAAAACTGAACACCATCAGCGCGCTGCCCACCGTTAACG ACACCAGCCGTGCGCGCATGCGCGATACGGTAGCCGAATTGTTTTCACCGGCACTGCTGCGTTCAACCTTGCTGATCTGGCTGGCCTTCTTTCTGGTGAT GTTCGGCTTCTACTTTGTGCTGAGCTGGACGCCCAGGCTACTGGTCTCGGCCGGCCTCTCCAACGCCCAAGGCATCACGGGCGGTGTACTGCTTAACATG GGCGGCATCGTCGGCACGACCGTCATCGGGCTGCTGGCTGCCCGCTACCCACTGGCTCGCCTGCTGATGCTGTACCTCATCATCAATGCGCTGTTGCTCG CGCTGTTCGTCCAGTTCACCCACAACCTCACACTGGCCTTTGCCGTGGCACTGGCCATCGGCGTATTCGTCAACGGCTGCGTCGCCGGGCTGTATGCCCT TGCCCCGTCTTTCTACAGCGCGTCACAGCGGGTAACAGGCCTGGGCTGGGGAATCGGCATGGGCCGTATCGGGGCCATCCTCTCACCGTTGGTTGCCGGT CACTTGATCGACGCCAACTGGAGCCCGTCGAAGCTCTACATCTTGTTTGCCAGCGCCTTCGTTCTGGCCGCGCTGGTGGTCTGGGGCCTCAAGCGCCGGG CAACGGCGCGCCTGGCACCGGCCAGCGCCAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTGAACTGACAAAAACAAGAAATCAGGATGCTCGCAATGACTAACCGTATGAGTTGCCCCCAGCTGTTGAGCATGGGCGCGCTGGGCGTGTGTGTGTCTT TCTGCGCCGAGGCAGAACTGCTGAAGGATTCAACCGTGACATTAATGTCACGCAACTTTTATCTGGACCGTGATTACAAGGGTGCCACACCGTACGCCGA AGCCAGGGAATGGGCGCAGGGTTTCATCCTCAAGGCCCACTCCGGCTTCACCGAAGGCCCCATTGGGCTGGGCCTGGACCTGACCGGCATGCTGGGTCTG AAGCTCGACTCGTCACCCGACAGAACCGCAACCCAGCTATTGGCCTTTAACCCGCAGACCCGACAGGCGCGTGACGAATACTCAGAGCTGGGGGCGGCAC TCAAAGCCAGGGTTTCCAAGACCCAACTCTCGGTAGGCACACAATTTCCCAACCTGCCGGTCCTCACCGGCAGCCCTGCGCGCCTGCTTCCACAAACCTT
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| Amino Acid Sequence |
>MFS transporter
MDKSIGQLMDEKPMVSSQWGVIALCILINMLDGFDVLVMAFTAASVSADWGLNGIRVGYLLSAGLVGMAIGSLFIAPWADRFGRRPLIMLCVSIAGLGML ASSQANSFETLAILRLITGLGIGGVLASSYVIAGEYANKKWRGLAISLQSTAYALGATIGGIIAAQIIPTQGWRSVFLYGGITTLSTLPLLFLWLPESLA FLTSRQPVGALAKINKLLVRVKLNTISALPTVNDTSRARMRDTVAELFSPALLRSTLLIWLAFFLVMFGFYFVLSWTPRLLVSAGLSNAQGITGGVLLNM GGIVGTTVIGLLAARYPLARLLMLYLIINALLLALFVQFTHNLTLAFAVALAIGVFVNGCVAGLYALAPSFYSASQRVTGLGWGIGMGRIGAILSPLVAG HLIDANWSPSKLYILFASAFVLAALVVWGLKRRATARLAPASAN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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