Strain | Pseudomonas sp. StFLB209 DNA, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CATCCTCGGGGTGCTTTACGAGAGCTTCGTCCACCCGCTGACGATCATCTCCACGCTACCCTCGGCGGGGATTGGCGCACTGCTGCTGTTGTGGATGATG GGCCATGACTTCTCGATCATGGCGTTGATTGGCGTGGTGCTGCTGATTGGTATCGTCAAGAAGAACGGCATCCTGCTGGTCGACTTTGCCCTGGAGGCGC ATCGCAATCAGGGCCTTTCGCCACACGATGCGATTTACACCGCCTGCCTGACGCGCTTTCGGCCGATCATGATGACCACCCTGGCCGCCTTGTTCGGTGC CCTGCCGCTGATGTTCGGGTTTGGCGCCGGTGCCGAGTTGCGCCAGCCGCTGGGGATCGCGGTGGTCGGTGGACTGCTGCTCAGCCAGGTGCTGACCCTG TTCACCACACCGGTGATCTACCTGCAACTCGAACGCGTGTTCCACCGCCGCCAGAACGCCCCGGCCACTGGCCAGGCGCTTCACACCTGAGAGGTTGCGC
|
|
DNA Sequence for Gene |
>PSCI_RS03355
ATGCGCGTGCTGATTATCGAAGACGAACAGAAAACCGCTGACTACCTGCATCGCGGCCTGAGCGAACAGGGCTATAGCGTGGATCTGGCCGCCGATGGCA TCGAGGGTCTGCACCTGGGTCTGGAGCACGACTACGCGGTGATCATCCTCGACGTCATGCTGCCGGGCCTGGATGGCTTCGGTGTGCTACGCGCCTTGCG TGCGCGTAAACAGACCCCGGTGATCATGCTCACCGCCCGCGAGCAGGTCGACGACCGGATTCGGGGCCTGCGCGAAGGCGCCGATGACTATCTGGGCAAG CCGTTTTCGTTCCTTGAACTGGTCGCCCGCCTGCAAGCCCTGACCCGTCGCAGCAGCACCCAGGAGCCGGTGCAGATCAGCATTGATGACCTGCGCATCG ATCTGCTCAGCCGCAAGGCCAGCCGTGCCGGCGTGCGCCTGGAATTGACCGCCAAAGAGTTTGCCCTGCTCAGCGTGCTGGCGCGCCGCCACGGCGAGAT CCTGTCCAAGACCTCCATCGCCGAGCAGGTCTGGGACATCAACTTCGACAGCGACACCAATGTCGTCGAGGTGGCCATCAAGCGTCTGCGGGCCAAGCTC GACGGCCCCCATGAACATAAACTGCTGCACACCATCCGTGGCATGGGCTATGTGCTGGAAGATCGCCGTGCGGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CTCCATTGCCCTGCGCCTGGGCAGCCTGTTCGCTCTGGTGGCCTTCGGTGTCTTCACCCTGATCGGCTGGGCGCTGTACCTGCAGGTCGACAAGCACCTG GACCTGCTGCCCGAGGCAGAAGTCGACGCACGCTATAGCGTGCTCGAATCGACAGTCAATCGCTTCGGCGACTTGCAGCACTGGAGCAAGCTCGGCAACA AGCTCAACCTGCTCAGCGAGGAGGATAAGCGTATCCGCTTCTGGGTGGTCAGCGATCATCCAGACTACGAGTATGGCAACCCCGACCCGCACATCCGCCG CTTCGCTCGTGGGCCGCTGGGCATGCGTGATTTGCTGCTGCCCGGCCAGCGTTTCCCGTACAAGGTGCTGGTCAGCGAGTTTCCCGCCAAAGACCAGCGC CCGGCCCTGCGCTTTCTCACCGCCATCGACACCCAGACCTTCTGGCAGACCCAGCACTCCTTGGTGGTCGCGCTGGTCAGCCTGGCGGTGATCGGCATTC
|
|
Amino Acid Sequence |
>transcriptional regulator
MRVLIIEDEQKTADYLHRGLSEQGYSVDLAADGIEGLHLGLEHDYAVIILDVMLPGLDGFGVLRALRARKQTPVIMLTAREQVDDRIRGLREGADDYLGK PFSFLELVARLQALTRRSSTQEPVQISIDDLRIDLLSRKASRAGVRLELTAKEFALLSVLARRHGEILSKTSIAEQVWDINFDSDTNVVEVAIKRLRAKL DGPHEHKLLHTIRGMGYVLEDRRAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|