Pseudomonas sp. StFLB209, PSCI_RS01800
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. StFLB209 DNA, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCAGCAGCGTCGGACGCAAGGGCCGTGCTTACTGGGGCGCCTACGGCGTGTCGAAGTTTGCCACCGAAGGGCTGATGCAGACCCTGGCCGATGAACTGGA CGGTGTGGCGGCGGTCCGTGCCAACAGCGTCAACCCCGGCGCGACCCGCACTGACATGCGCGCCCAGGCCTATCCTGCCGAGAATCCCCTCGACAACCCC ACTCCCGAACAGATCATGCCGGTGTACCTGTACCTGATGGGGCCGGACAGCGCTGGCATCAACGGCCAGGCGTTCAACGCCCAAAAATGATGTGCAAGGC GTCACATGCGGCGGCAAAACGACGCATAGTGACGCCGAAATCTGTTAAAACATGCCCCTGCGTCAAGCCGCTGCCGCTATCTTGGGCGCCATCTCATCTG TAAGACGTTGTTTTTTCTAGCATTCAGGATGAATGAACCGATTGGCATGCATTTCGCTCTAACCAAACCAGCCTCAAGGAATGTGCTGAGGAGTGAATAG
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| DNA Sequence for Gene |
>PSCI_RS01800
ATGAGTTCTCCACCCCGGATCGACCCAGTAGTCATTGATACCAGCAGCGTGCCGCGCCCATCCGCGCGCCCTCGCCTGTCAGTTCAGGAACACCCTGTGG ACATGCGTCAACTGGGTTATCAACTGGCTCAGCAACTGCAGACCAGCCTGGAGGCCGACCGCATCCTGGAGATGTTCTGCAAGGGGCTGACCCAGGCCGG GCTGCTCGATGGCCTCACTTACAGCCATGCCGCCAGTGACCTGCAACTGTCGTTCGGCGACTGCACCCCACCTGCCACCCGTTACGATCTCAGCCATGCT GGCGAGCCGCTCGGGCAACTGGAACTGCATCACCGCCATCCGTTGGGTGCTGCGCTGGGCGATGACCTGCAAGCGCTGGTCAGCTGCCTTCTCTACCCTT TGCGCAATGCCTTGCTGTACCGGATGGCGATCAAAAGCGCGTTGCGTGATCCGCTGACCGATACAGGCAATCGTGTTGCGATGGATCAGGTTCTGACCCG GGAGGTGGATGACTCGCGGCGTTATCGCCAGCCGCTGTCGTTGCTGATGCTGGATATCGACCATTTCAAGCAGATCAATGACACCCATGGGCACGTCAAT GGTGACCAGGTACTCAAAAGTGTGGCGCAGACGCTCAAGCAGCAAGTGCGCAATGTCGACCGGGTGTTTCGCTACGGCGGCGAGGAGTTCGTGATCATTC TGGCAAACACTGATCGCGAGGCCGCGGCGATGATTGGCGAACGTTTGCGCCAGACGGTGGAGGCGCTGGAGGTCGTTGGTCTGGATGGCCTGCGGCCAAG TATCAGCCTGGGCTGCGCGACATTATTGCCGGCCGAATCGGTCGACAGCTTGCTGCGCCGGGCTGACAGTGCGCTGTATGCGGCCAAGCGTGAAGGCCGC AACCGGATGATGATGGCGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCCGCCACAGGAGCGGCGTTAGCCACGATACATTGCGTGTTTCGAATGTTCTTCGCGGATAAATCCGCTCCCGCACATCCCCACCCGACCCGTATCTTT ACGCAGGTTCGGCGAGCAGTTCACGTACCGGCTTACTGCTGCGTTCAAGTTGCATACAGCGTTCCAGAAACAGGTACATGTAGTCGTAGCTGCGGGTAAT GGCCTGACGCAATTCATATTGCTGCGCTTCGCTGGCATGGTTGCCGATCAGGGTGCAGATGATTTCCAGCGCTTCCCATGGATGGGCGTCGTCGTACTGG GCGTGCATCTTCAGCCATTTCATGGCCCGTTTGCGGGATTCATCCGGGAAGGCTTCGGCGTAGGTGCCGGTGGAGCACACCAGGGCAGCCCATTCGCCGG TAGCGCCCTCGATAGCATAGTTGGTCGCCGCCATGGCCACTGCCAGGCTGTCGCTGGTGCAGCTCTGCGAGCACCAGTGGCTCAACGCATGCAGCTCAGG
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| Amino Acid Sequence |
>DeoR family transcriptional regulator
MSSPPRIDPVVIDTSSVPRPSARPRLSVQEHPVDMRQLGYQLAQQLQTSLEADRILEMFCKGLTQAGLLDGLTYSHAASDLQLSFGDCTPPATRYDLSHA GEPLGQLELHHRHPLGAALGDDLQALVSCLLYPLRNALLYRMAIKSALRDPLTDTGNRVAMDQVLTREVDDSRRYRQPLSLLMLDIDHFKQINDTHGHVN GDQVLKSVAQTLKQQVRNVDRVFRYGGEEFVIILANTDREAAAMIGERLRQTVEALEVVGLDGLRPSISLGCATLLPAESVDSLLRRADSALYAAKREGR NRMMMAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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