Pseudomonas sp. StFLB209, PSCI_RS01115
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. StFLB209 DNA, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGGTTATCTGCTCAAGAGTGCCAGTGTGCTGGAACTGGAGCTGGCGCTGCAGTCGTTGCGCAGCGGCGGGCAGTATCTGTCGTCGGCAGTGGTGCCGATG GTGGTCAGCCAGGCGGTGAAAAAGACCCTGGTGCAGCCGACCCGCAGCAGTAATGTGGCGCTGACCGAACGCCAGCTGGAGATCCTGCGCCTGATCGCCC GTGGCGAGTCGACACGCTCGATTGCCGGCGGCCTGGGGTTGTCGGTCAAGACCGTCGAGGCCCATCGCTCGCAGGTCATGCATCGCCTGGGCATTCACGA TATCGCCAGCCTGGTGTTGTTCGCGGTACGTGAAGGGATTATCGAAGTCAATGACTGAGCGTTTTCAGGCTCAGCTAAAAACCGGACACGACACATCTGC TCAAGCCATGCCTGGTCAGCCGGGTCAAAGTTAGCGCTTTGATTCAGAGGCATCAGGCATGCGCGGTTTGGTTCTGTTCAACGGGCTACTACTTACCGCC
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| DNA Sequence for Gene |
>PSCI_RS01115
CTGGCTCATGGCGCGCAGGCTCAGGACAACAGCTTTTGGCAGGACGCCCAGGCTGGCGTACTGGCACGTAATTACTTCCTGCACAACGACTACCGTAACG ACCGGGTTCGCGAGCAGAACTACAGCCAGGAGTGGGCGCAGGGGTTTATCGGCCACTTCAATTCCGGCTTTACCTCAGGCAACGTGGGCCTGGGAATCGA TGCGCATGGTTTTTTCGGTCTGCGCCTGGACAGTGGTCGCGGCACGGCGGGTACCGGCCTGCTGCCGCTGGACAGCGATGGCCGCGCCGAACCGGATTAC TCCTCGGCAGGCGCGGCACTGAAGCTGCGCCTGGGCGCCACGCAGTTGCGGGTGGGCGAGATGGAGGTCGAGACGCCAGTGTTCGACACCGCCGACAAGC GCCTGCAACCGGAGTACGCCACTGGCTGGTTGCTCGACAGCCTTGACGTGCCGGGCGTGCGCCTGGTGGCCGGGCGCTTTACCGCGTTCAAGAACCAGAA CCAGTCCACCGGCCGTGGTGATCTGGAGGGCTACGGCGCCAGCACCGCCGGACAGAGCATCAGCCTGGCCGGGATTGAAAGCCGCAGTGACCAGGCGCTG GGCGGTGCGTTGTATATCGGAGAGTTGAGCGACACCTGGCGGCAGTATTACGGCAACCTGCATGGCGGTCATCTGCTGGGTCCCCAGACGCGGTTTGACT GGGATGCCAACCTGTATCGCACACTGGACAGTGGTCAGGCGAGTGCCGGTGCGATTGCCAATACGGCGGCCAGCCTGCTGCTGAAACTGACCCATGCCCG GCAGGCTTTCAGTTTCGGTTACCAGAAGATCCATGGTGATACGCCGTTCGACTTTGTCGGCGGTGATTCGATCTATCTGGCCAACTCGATCAAGTACAAC GACTTCAATGGCCCTGGCGAGCAGTCCTTTCAGGCGCGTTATGACCTGGATCTGGGTGATGTGTTTTCGGGTTTGAGTTTTATGGGCCGCTATGTGCGCG GCAGTGGTATCGATGGCACCGATGCGCCACGCGGTGGTGCGTACAACCGGTTTGCTGGCGCTGAGGATCGCTATGTGCCGTTGCAAGGCAAAGGTGGCAG GCATTGGGAACGCGACCTGACTCTGGCCTACAAGGTCCCGGCAGGCGCCTTGCAGGGGCTGTCGGTGGAGTTGTCGTATGTGACCCATCGGGGCAATGCG GCGCAGGGTAATAACGATCTGGATCGGCTGTATGTGGTTGTGCAGTATCCGTTGGATATCTTGCGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCAGGAGCGGCCGTGCAACGATCCGCTTTAGCCGCAATACTGTTGATCGATTGTGGTTGCAGGAGATGGGCTGATCATACATTCACTTAGGCACTGTGTG CCCCCGGTGGGAGCGACCTTGGTCTGGGTGGCACTCCGACGAAGAGGCCAGTAAAAGCACTACATCTGCTGCGAATGTGCCGCCGTCTTCGCTAGCAACC GGAGCGCCGGCCGACAGCTCCCACCGGTCTAATTGAGCAGGAGCAGCCGGGCCGGTAAAACCGGTCCATCTGCTCGTTATGCACGACTGCATTCGCCAGC AGAGCTGGCTCCCACAAAGACCGCATCGACCTTAAATGATCAGCTACGGCCGATCCCCGGTTTCGATACTGCCTTGCAAGCGCTCCTTGAGAAACTCGAT AAACGCCTGCACCGGCCGGGAAGTCTGGCGGTGTTGCGGGTAGACCGCCGAGAGGGTCAGCGGTGGCGGGCACAAGTCGTCGAGGACCCGCACCAGGCTG
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| Amino Acid Sequence |
>membrane protein
MAHGAQAQDNSFWQDAQAGVLARNYFLHNDYRNDRVREQNYSQEWAQGFIGHFNSGFTSGNVGLGIDAHGFFGLRLDSGRGTAGTGLLPLDSDGRAEPDY SSAGAALKLRLGATQLRVGEMEVETPVFDTADKRLQPEYATGWLLDSLDVPGVRLVAGRFTAFKNQNQSTGRGDLEGYGASTAGQSISLAGIESRSDQAL GGALYIGELSDTWRQYYGNLHGGHLLGPQTRFDWDANLYRTLDSGQASAGAIANTAASLLLKLTHARQAFSFGYQKIHGDTPFDFVGGDSIYLANSIKYN DFNGPGEQSFQARYDLDLGDVFSGLSFMGRYVRGSGIDGTDAPRGGAYNRFAGAEDRYVPLQGKGGRHWERDLTLAYKVPAGALQGLSVELSYVTHRGNA AQGNNDLDRLYVVVQYPLDILR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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