Pseudomonas sp. RIT288, BW33_RS27880 (obgE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. RIT288 contigs9, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TATTCAGGCTTAATTACAGCCTAATTCCTCACTAGGAGAATTGAACTCATGGCACACAAAAAAGCTGGTGGTAGTACCCGTAACGGTCGCGACTCAGAAG CCAAACGCCTTGGCGTGAAGATGTATGGCGGCCAGGTCATCAAGGCCGGCAACATCATCGTGCGTCAGCGCGGCACCCAATTCCACGCTGGCTACGGCGT TGGCATGGGTAAAGATCACACCCTCTTCGCGAAAATCGAAGGCGTGATCAAGTTTGAAGTAAAAGGCGCCTTCGGTCGTCGTTACGTGAGCGTTGTCGCG GCTTAATCGCGAGATCGCTGGAAGAGCCCTGTCTTGCGACGGGGCTTTTTCGTTTGTGGGGTGAGTCTCTTGCAAAACTGTTTGTATGGGCTGTCGGCGT GCGATGCAGGTCGTGTTTTGGGGTCGCTGCGCTCATTTTTGCAAGAGTCTTATGTCTTGATTGTTTTTCGGCTCGTCCGTATGGCGAGAGGCGTTGAGTT
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| DNA Sequence for Gene |
>BW33_RS27880
|obgE
ATGAAGTTTGTAGACGAAGTATCGATCCGCGTAAAAGCTGGCGACGGCGGCAATGGCTGCATGAGTTTCCGTCGGGAAAAATTCATTGAAAACGGTGGTC CGAACGGCGGTGACGGCGGTGACGGCGGTTCCATCTACATGATGGCCGACGAGAACCTCAATACCCTGGTCGACTACCGTTACACCCGGCACTTCGATGC CGAGCGTGGCTCCAACGGCGGCAGCACCGATTGCACCGGCAAGAAGGGTGAAGACCTGATCCTGCGCGTGCCGGTCGGTACCACCGTGATTGACTCGGCC ACCCAGGAAGTGATTGGCGACCTGACCAAGGCTGGCCAGAAACTGATGGTAGTGCAGGGTGGTTGGCACGGTCTGGGCAACACCCGTTTCAAATCCAGTA CCAACCGTGCGCCGCGCCAGACCACTCCGGGCAAGCCGGGTGAGCAGCGCGACCTGAAGCTGGAAATGAAAGTGCTGGCTGATGTCGGTCTGCTGGGCTT GCCGAATGCTGGTAAAAGTACCTTTATCCGTTCGGTGTCGGCGGCCAAGCCGAAAGTTGCCGACTACCCGTTCACCACGCTGGTGCCGAACCTGGGTGTG GTCAGCGTTGATCGCTGGAAAAGCTTCGTCATTGCCGACATTCCGGGGTTGATCGAAGGTGCTTCCGACGGCGCCGGTCTGGGTATTCGTTTCCTCAAGC ACCTGGCGCGTACGCGTCTGTTGCTGCACCTCGTCGACATGGCGCCGCTGGATGACACCAGTGCACCGGACGCGGCCGAAGTGATCGTCAACGAGCTGGT CAAATTCAGCCCCTCGCTGGCCGAGCGTGATCGCTGGCTGGTGCTGAACAAATGCGACCAGATCCTTGAAGAAGAGCACGAAGAGCGCGTCAAGGAAATC GTTGATCGCCTGCAGTGGGAAGGTCCGGTCTATGTGATCTCGGCCATCGCCAAAGAAGGCACCGAGCGCCTGACCCGCGACATCATGCGTTATCTGGAAG ATCGTGCCGATCGCCTGGCCAACGACCCTGCGTACAAGGAAGAGCTGGCCGATCTCGATCAGCGCATCGAAGATGAAGCCCGTGCACAGTTGCAGGCGCT GGATGACAAGCGTGCCCTGCGTCGCAGCGGCGTGAAGTCGGTCCACGACATCGGCGACGATGACTGGGACGAAGAAGATGTGGATGATGAAGACGGTCCG GAAATCATTTACGTGCGCGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCTGTTGCGATAAACTTGAACGCCGCTCAATCGAGCGGCGTTTTGGTATCTGGAAATCGGTAGTCACGATTAACGGGCAGCGCTGGGTCGCGCTGTCCTC AAGCTAAGGTTGAAGATGATGCGGAGCAAGGTGACAGGTGCGCAGCGTTGGGTCGTGAAGATCGGCAGCGCTTTGCTGACAGCTGATGGCAAAGGGCTGG ATCGTGCGGCAATGAGTGTCTGGGTCGAGCAGATGGTCGCCCTGCATGAGGCGGGTGTCGAGTTGGTGCTGGTGTCCTCCGGGGCGGTGGCTGCCGGCAT GAGTCGCCTGGGCTGGACCGCACGACCCAGTGCGATGCACGAGCTCCAGGCCGCAGCTGCAATTGGCCAGATGGGGCTGGTGCAGGCTTGGGAGTCGAGC TTTGCCGAGCATGGTCGGCACACCGCGCAGATTCTCCTGACTCACGATGACTTGTCCGACCGCAAGCGCTACCTCAACGCTCGCAGCACCCTGCGTGCGC
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| Amino Acid Sequence |
>GTPase CgtA
MKFVDEVSIRVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSIYMMADENLNTLVDYRYTRHFDAERGSNGGSTDCTGKKGEDLILRVPVGTTVIDSA TQEVIGDLTKAGQKLMVVQGGWHGLGNTRFKSSTNRAPRQTTPGKPGEQRDLKLEMKVLADVGLLGLPNAGKSTFIRSVSAAKPKVADYPFTTLVPNLGV VSVDRWKSFVIADIPGLIEGASDGAGLGIRFLKHLARTRLLLHLVDMAPLDDTSAPDAAEVIVNELVKFSPSLAERDRWLVLNKCDQILEEEHEERVKEI VDRLQWEGPVYVISAIAKEGTERLTRDIMRYLEDRADRLANDPAYKEELADLDQRIEDEARAQLQALDDKRALRRSGVKSVHDIGDDDWDEEDVDDEDGP EIIYVRD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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